Detailed information NTG0646896

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OHA84_RS14375
• Genome accession: NZ_CP107845
• Coordinates: 3099584..3100609 (-)
• Length: 341 a.a.
• NCBI ID: WP_266971408.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00513
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3094584..3105609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA84_RS14345 (OHA84_14320)	-	3095095..3095664 (-)	570	WP_266971411.1	GPR1/FUN34/YaaH family transporter	-
OHA84_RS14350 (OHA84_14325)	-	3095764..3096294 (-)	531	WP_053674694.1	universal stress protein	-
OHA84_RS14355 (OHA84_14330)	-	3096780..3097100 (+)	321	WP_266947564.1	hypothetical protein	-
OHA84_RS14360 (OHA84_14335)	-	3097477..3098649 (+)	1173	WP_053674690.1	helix-turn-helix domain-containing protein	-
OHA84_RS14365 (OHA84_14340)	orn	3098762..3099364 (+)	603	WP_053674688.1	oligoribonuclease	-
OHA84_RS14375 (OHA84_14350)	cytR	3099584..3100609 (-)	1026	WP_266971408.1	LacI family DNA-binding transcriptional regulator	Regulator
OHA84_RS14380 (OHA84_14355)	-	3100724..3102040 (+)	1317	WP_053674684.1	ABC transporter substrate-binding protein	-
OHA84_RS14385 (OHA84_14360)	-	3102048..3103028 (+)	981	WP_053674681.1	carbohydrate ABC transporter permease	-
OHA84_RS14390 (OHA84_14365)	-	3103025..3103849 (+)	825	WP_266947566.1	carbohydrate ABC transporter permease	-
OHA84_RS14395 (OHA84_14370)	-	3103855..3105207 (+)	1353	WP_266947567.1	GH1 family beta-glucosidase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36055.84 Da
• Isoelectric Point: 5.9434

>NTDB_id=646896 OHA84_RS14375 WP_266971408.1 3099584..3100609(-) (cytR) [Streptomyces sp. NBC_00513]
MNGHGRSGGRPTLEEVAVRAGVGRGTVSRVINGSSKVSEHTRAAVEAAVAELGYVPNRAARALAANRTDAIALVIPEPEA
RFFAEPYFSDVVRGVGATLAETDVQLVLTLAGSERERRRLAQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPAVISGRR
SADETLPSVDSDNLAGAAEAVRHLLGRGRRVIATVTGPLDVYGAQCRLDGYRQALQAAGHPVDEALIAVGDFTQEGGARA
VRELLDRRPDLDAVFAASDVMAAGARRELRAAGRRIPADVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMARVLLERI
AGESGETAVVLPTELVVRESS

Nucleotide

• Length: 1026 bp

>NTDB_id=646896 OHA84_RS14375 WP_266971408.1 3099584..3100609(-) (cytR) [Streptomyces sp. NBC_00513]
ATGAACGGGCACGGGCGCAGCGGGGGACGGCCGACGCTGGAGGAGGTCGCGGTCCGGGCCGGGGTCGGACGCGGCACGGT
CTCCCGGGTGATCAACGGATCCTCCAAGGTCAGCGAGCACACCAGGGCCGCCGTCGAGGCCGCCGTCGCCGAGCTCGGCT
ACGTCCCCAACCGGGCCGCCCGGGCCCTCGCCGCGAACCGCACCGACGCCATCGCCCTCGTCATCCCCGAGCCCGAGGCC
CGCTTCTTCGCCGAGCCGTACTTCTCCGACGTGGTGCGCGGAGTCGGCGCCACCCTCGCCGAGACCGACGTGCAGCTGGT
GCTCACCCTCGCCGGCAGCGAGCGGGAACGCCGCCGACTGGCCCAGTACCTGTCCGGGCACCGCGTCGACGGGGTGCTGC
TGGTCTCCGTGCACGCCGGTGACCCGCTCCCGGAGCTGCTCGCCGAACTCGGCATCCCCGCGGTGATCAGCGGACGCCGC
TCGGCCGACGAGACGCTCCCCAGCGTGGACTCCGACAACCTCGCCGGAGCCGCCGAGGCCGTACGCCACCTCCTCGGCCG
GGGCCGGCGCGTGATCGCCACCGTCACCGGACCCCTCGACGTGTACGGCGCCCAGTGCCGCCTCGACGGCTACCGGCAGG
CCCTCCAGGCCGCCGGGCACCCGGTCGACGAGGCACTGATCGCGGTCGGGGACTTCACCCAGGAGGGCGGCGCCCGGGCC
GTGCGCGAGCTGCTGGACCGCCGGCCGGACCTCGACGCCGTCTTCGCCGCCTCCGACGTCATGGCGGCGGGCGCCCGCCG
CGAGCTGCGGGCCGCCGGTCGCCGCATCCCCGCTGACGTGGCACTGGTCGGCTTCGACGACTCGGTGGTGGCCCGCCACA
TGGACCCGCCGCTGACCAGCGTGCGCCAGCCGATCGAGGAGATGGGCCGCACCATGGCGCGTGTCCTGCTGGAGCGGATC
GCCGGCGAGTCGGGGGAGACGGCGGTCGTCCTGCCGACGGAGCTGGTGGTTCGGGAATCCTCCTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.5	98.534	0.37
cytR	Vibrio parahaemolyticus RIMD 2210633	36.607	98.534	0.361