Detailed information NTG0646828

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: L0B52_RS03025
• Genome accession: NZ_CP090975
• Coordinates: 643814..644815 (+)
• Length: 333 a.a.
• NCBI ID: WP_235065067.1
• Uniprot ID: -
• Organism: Suttonella sp. R2A3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 638814..649815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L0B52_RS03005 (L0B52_03005)	-	639720..639902 (+)	183	WP_235065063.1	methyltransferase regulatory domain-containing protein	-
L0B52_RS03010 (L0B52_03010)	-	640028..641902 (+)	1875	WP_235065064.1	TonB-dependent receptor domain-containing protein	-
L0B52_RS03015 (L0B52_03015)	-	641914..642888 (+)	975	WP_235065065.1	ABC transporter substrate-binding protein	-
L0B52_RS03020 (L0B52_03020)	-	642901..643719 (+)	819	WP_235065066.1	hypothetical protein	-
L0B52_RS03025 (L0B52_03025)	pilA	643814..644815 (+)	1002	WP_235065067.1	signal recognition particle-docking protein FtsY	Machinery gene
L0B52_RS03030 (L0B52_03030)	rpoH	644832..645704 (+)	873	WP_235065068.1	RNA polymerase sigma factor RpoH	-
L0B52_RS03035 (L0B52_03035)	fur	645803..646216 (+)	414	WP_235065069.1	ferric iron uptake transcriptional regulator	-
L0B52_RS03040 (L0B52_03040)	rpe	646320..647000 (-)	681	WP_235065070.1	ribulose-phosphate 3-epimerase	-
L0B52_RS03045 (L0B52_03045)	-	647068..647766 (+)	699	WP_235065071.1	biotin--[acetyl-CoA-carboxylase] ligase	-
L0B52_RS03050 (L0B52_03050)	-	647763..648494 (+)	732	WP_235065072.1	type III pantothenate kinase	-
L0B52_RS03055 (L0B52_03055)	-	648553..649419 (-)	867	WP_235065073.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36683.89 Da
• Isoelectric Point: 5.8862

>NTDB_id=646828 L0B52_RS03025 WP_235065067.1 643814..644815(+) (pilA) [Suttonella sp. R2A3]
MAFNWLKKKKSDPEISENPPAETPQPVEVNEKIGYFQRLKQGLSKTRQGFGDVFLGKKKIDGDTLEDLEMLLLSADVGIE
TTETLIDAINRKIKRNEVNDSDALHQALHTHMCEILTPFAEPLDVSTQQPFIILMTGINGAGKTTTIGKLTQQFKNDGKK
VMLAAGDTFRAAAVEQLKAWGERNDVPVIAQNTGADSASVAYDAVQSAQARNMDVLIIDTAGRLHTQDHLMEELKKIKRV
IQKVAPDAPHETMLVIDAGNGQNALRQAREFDAAMQIDGITLTKLDGTAKGGIIFAITHALQRPVRYIGVGEHIDDLRVF
NAQTFVDALLYKE

Nucleotide

• Length: 1002 bp

>NTDB_id=646828 L0B52_RS03025 WP_235065067.1 643814..644815(+) (pilA) [Suttonella sp. R2A3]
ATGGCATTTAATTGGCTTAAAAAGAAAAAGAGCGATCCTGAAATAAGCGAAAACCCACCGGCTGAAACCCCTCAGCCGGT
CGAGGTCAACGAAAAGATCGGTTATTTTCAGCGTTTAAAACAAGGATTAAGTAAAACCCGTCAAGGGTTTGGCGATGTTT
TCCTCGGCAAAAAGAAAATTGACGGCGATACGCTCGAAGATTTAGAAATGCTTTTATTGAGCGCTGATGTGGGCATTGAA
ACCACCGAAACGTTGATCGATGCCATCAACCGCAAAATTAAACGTAACGAAGTCAACGACAGCGATGCTTTGCACCAAGC
CTTGCATACGCATATGTGCGAGATTCTCACCCCTTTCGCTGAGCCGCTTGATGTCAGCACACAGCAGCCGTTTATTATCT
TGATGACCGGGATTAATGGTGCGGGTAAAACCACCACTATTGGCAAACTCACCCAGCAATTTAAAAATGATGGTAAAAAA
GTCATGCTCGCCGCTGGCGATACGTTTCGCGCGGCAGCCGTTGAGCAATTAAAGGCCTGGGGGGAGCGTAATGATGTTCC
GGTGATTGCGCAAAACACAGGCGCTGATTCAGCATCTGTCGCCTACGACGCCGTACAATCAGCGCAAGCGCGCAATATGG
ATGTGTTAATCATCGATACCGCCGGACGCTTACACACCCAAGACCACTTGATGGAAGAACTGAAAAAAATCAAACGCGTC
ATTCAAAAAGTTGCCCCTGACGCACCGCATGAAACGATGCTGGTGATCGATGCCGGTAACGGGCAGAACGCACTGCGCCA
GGCGCGCGAGTTTGACGCCGCAATGCAGATTGATGGCATCACCTTAACTAAATTAGACGGCACCGCCAAAGGCGGGATCA
TCTTCGCCATTACCCATGCTTTGCAACGCCCAGTGCGTTATATCGGCGTTGGTGAACATATTGATGATTTACGGGTTTTT
AACGCACAAACCTTCGTAGATGCGTTATTATATAAAGAATAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (50-111)

• SRP54-type protein, GTPase domain (SRP54) (131-330)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.961	91.291	0.483