Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OG710_RS07870 Genome accession   NZ_CP107834
Coordinates   1760330..1762063 (+) Length   577 a.a.
NCBI ID   WP_330238676.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00525     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1755330..1767063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG710_RS07830 (OG710_07845) - 1755722..1756369 (+) 648 WP_330238672.1 DUF2867 domain-containing protein -
  OG710_RS07835 (OG710_07850) - 1756366..1757148 (+) 783 WP_330238673.1 class I SAM-dependent methyltransferase -
  OG710_RS07840 (OG710_07855) - 1757136..1757696 (+) 561 WP_330238674.1 DinB family protein -
  OG710_RS07860 (OG710_07875) - 1758349..1758654 (+) 306 WP_111331891.1 YtxH domain-containing protein -
  OG710_RS07865 (OG710_07880) - 1758732..1760177 (+) 1446 WP_330238675.1 FGGY family carbohydrate kinase -
  OG710_RS07870 (OG710_07885) rcrP 1760330..1762063 (+) 1734 WP_330238676.1 ABC transporter ATP-binding protein Regulator
  OG710_RS07875 (OG710_07890) rcrQ 1762063..1763994 (+) 1932 WP_111331884.1 ABC transporter ATP-binding protein Regulator
  OG710_RS07880 (OG710_07895) rpoS 1764060..1765049 (-) 990 WP_241989946.1 RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62627.76 Da        Isoelectric Point: 5.3829

>NTDB_id=646649 OG710_RS07870 WP_330238676.1 1760330..1762063(+) (rcrP) [Streptomyces sp. NBC_00525]
MLIKILRAYLGPYQKPLAVLVVLQLLQTCATLYLPTLNADIIDNGVVRGDAGYILRYGGVMLVVSVAQVVCNIGAVYIGA
RTASALGRDVRAAVFDRVQSFSSREVGRFGAPSLITRTTNDVQQIQMLVLMTFTLMVSAPIMCVGGIIMALGQDVPLSAV
LLAVVPVLGIAVSLIVRKMRPLFRLMQTRLDTVNRVLREQITGNRVIRAFVRDAYEEERFRGANTELTDVALSTGRLMAL
MFPTVMTVVNVSSIAVVWFGAHRIDSGGMEIGALTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETESSVVP
PVEPVRELRAHGHLEVRGADFRYPGAEEPVLRSVDLVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTDGQVLVDGTDVR
TLDPVLLSKIVSLVPQKPYLFSGTVATNLRYGNPDATDAELWHALEVAQAKEFVEDLEHGLDAPIAQGGTNVSGGQRQRL
SIARTLVQRPEIYLFDDSFSALDYATDAALRAALGRETAEATVVIVAQRVSTIRDADRIVVLDEGRVVGTGTHHELMAGN
DTYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=646649 OG710_RS07870 WP_330238676.1 1760330..1762063(+) (rcrP) [Streptomyces sp. NBC_00525]
GTGCTCATAAAAATCCTGCGGGCCTATCTCGGTCCGTATCAGAAACCACTCGCGGTGCTGGTCGTTCTGCAGCTGTTGCA
GACCTGCGCCACGCTCTATCTCCCGACCCTCAACGCGGACATCATCGACAACGGTGTCGTGCGGGGGGACGCGGGCTACA
TCCTCCGGTACGGCGGCGTGATGCTCGTCGTCAGCGTCGCCCAGGTGGTCTGCAACATCGGCGCCGTGTACATCGGCGCC
CGTACCGCCTCCGCGCTCGGCCGGGACGTGCGGGCGGCGGTCTTCGACCGGGTGCAGTCGTTCTCCTCGCGCGAGGTGGG
ACGGTTCGGCGCCCCGTCGCTGATCACCCGTACGACCAATGACGTCCAGCAGATACAGATGCTGGTGCTGATGACGTTCA
CGCTGATGGTGTCCGCGCCGATCATGTGCGTCGGCGGCATCATCATGGCGCTGGGCCAGGACGTGCCGCTCTCGGCGGTG
CTCCTGGCGGTGGTGCCGGTGCTCGGGATCGCGGTCAGTCTGATCGTGCGGAAGATGCGTCCGCTGTTCCGGCTGATGCA
GACGCGGCTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGCGTGATCCGCGCCTTCGTGCGGGACG
CGTACGAGGAGGAGCGCTTCCGGGGCGCCAACACCGAGCTGACGGACGTGGCCCTGTCGACGGGCCGGCTGATGGCGCTG
ATGTTCCCGACGGTGATGACGGTCGTGAACGTGTCGTCGATCGCCGTCGTCTGGTTCGGCGCGCACCGCATCGACAGCGG
CGGGATGGAGATCGGCGCGCTGACCGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCGGTGATGATGGCGACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCGGAGCGTATCCAGGAGGTCCTGGAGACCGAGTCCAGCGTCGTGCCG
CCCGTCGAGCCGGTCCGCGAGCTGCGCGCCCACGGGCATCTGGAGGTGCGCGGCGCGGACTTCCGCTATCCGGGCGCCGA
GGAGCCGGTGCTGCGGTCGGTGGACCTGGTGGCCCGGCCGGGCGAGACGACCGCGATCATCGGGTCCACGGGCAGCGGGA
AGTCGACGCTGCTCGGTCTTGTGCCCCGGCTGTTCGACGTGACGGACGGCCAGGTGCTGGTCGACGGGACGGATGTGCGG
ACGCTCGACCCGGTGCTGCTGTCGAAGATCGTGAGCCTGGTCCCGCAGAAGCCGTATCTGTTCTCCGGGACGGTGGCGAC
GAACCTGCGGTACGGGAATCCGGACGCGACCGACGCCGAGCTGTGGCACGCGCTGGAGGTGGCCCAGGCGAAGGAGTTCG
TCGAGGACCTGGAACACGGCCTGGACGCGCCGATCGCGCAGGGCGGCACCAATGTCTCGGGCGGTCAGCGCCAGCGGCTG
TCGATCGCGCGGACGCTGGTGCAGCGCCCGGAGATCTATCTCTTCGACGACTCGTTCTCGGCGCTGGACTACGCCACGGA
CGCGGCGCTGCGGGCCGCGCTCGGGCGGGAGACGGCGGAGGCGACGGTGGTGATCGTGGCCCAGCGGGTGTCCACGATCC
GCGACGCGGACCGGATCGTCGTGCTGGACGAGGGTCGGGTCGTGGGCACCGGCACGCACCACGAGCTGATGGCCGGCAAT
GACACGTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-498)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

41.392

94.627

0.392