Detailed information NTG0646538

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG861_RS20165
• Genome accession: NZ_CP107811
• Coordinates: 4487168..4488193 (+)
• Length: 341 a.a.
• NCBI ID: WP_329195426.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00539
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4482168..4493193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG861_RS20140 (OG861_20140)	-	4482201..4482533 (+)	333	WP_329195433.1	hypothetical protein	-
OG861_RS20145 (OG861_20145)	-	4482586..4483914 (-)	1329	WP_329195431.1	GH1 family beta-glucosidase	-
OG861_RS20150 (OG861_20150)	-	4483920..4484744 (-)	825	WP_329195429.1	carbohydrate ABC transporter permease	-
OG861_RS20155 (OG861_20155)	-	4484741..4485694 (-)	954	WP_329202201.1	sugar ABC transporter permease	-
OG861_RS20160 (OG861_20160)	-	4485723..4487054 (-)	1332	WP_329195427.1	extracellular solute-binding protein	-
OG861_RS20165 (OG861_20165)	cytR	4487168..4488193 (+)	1026	WP_329195426.1	LacI family DNA-binding transcriptional regulator	Regulator
OG861_RS20175 (OG861_20175)	orn	4488432..4489034 (-)	603	WP_329195424.1	oligoribonuclease	-
OG861_RS20180 (OG861_20180)	-	4489126..4490292 (-)	1167	WP_136214349.1	helix-turn-helix domain-containing protein	-
OG861_RS20185 (OG861_20185)	-	4490669..4491094 (-)	426	WP_329195421.1	hypothetical protein	-
OG861_RS20190 (OG861_20190)	-	4491415..4491945 (+)	531	WP_329195419.1	universal stress protein	-
OG861_RS20195 (OG861_20195)	-	4492045..4492614 (+)	570	WP_329195417.1	acetate uptake transporter	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 35863.74 Da
• Isoelectric Point: 6.2595

>NTDB_id=646538 OG861_RS20165 WP_329195426.1 4487168..4488193(+) (cytR) [Streptomyces sp. NBC_00539]
MSGQGRSGGRPTLEEVAVRAGVGRGTVSRVINGSSKVSEHTRAVVEAAVAELGYVPNRAARALAANRTDAVALVIPEPEA
RFFAEPYFSDVVRGVGATLAETDVQLVLTLAGGERERRRLAQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPTVISGRR
SADEALPCVDSDNLAGAAGAVAHLLGRGRRSVATITGPRDVYGAQCRLDGYRQALAAAGHAVDEQLIAAGDFTEEGGRRA
MRELLERRPALDAVFAASDVMAAGARLELRAAGRRIPQDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMARLLLERI
AGGPADAAVVLPTELVVRESS

Nucleotide

• Length: 1026 bp

>NTDB_id=646538 OG861_RS20165 WP_329195426.1 4487168..4488193(+) (cytR) [Streptomyces sp. NBC_00539]
ATGAGCGGGCAAGGGCGCAGCGGGGGACGGCCGACCCTGGAGGAGGTCGCGGTCCGTGCCGGTGTGGGACGCGGCACCGT
CTCCCGGGTGATCAACGGGTCCTCCAAGGTCAGCGAGCACACCAGGGCCGTCGTGGAGGCCGCCGTCGCCGAACTGGGGT
ACGTACCCAACCGCGCCGCCCGGGCGCTGGCCGCCAACCGTACGGACGCCGTCGCCCTCGTCATCCCCGAACCCGAGGCC
CGTTTCTTCGCCGAGCCCTACTTCTCCGACGTGGTGCGCGGCGTCGGGGCCACCCTCGCCGAGACCGACGTCCAGCTGGT
GCTCACCCTGGCCGGCGGGGAACGGGAGCGCCGGCGCCTCGCCCAGTACCTGTCCGGGCACCGCGTCGACGGGGTCCTGC
TGGTCTCCGTGCACGCCGGGGACCCGCTGCCGGAGCTCTTGGCCGAGCTGGGCATCCCGACCGTGATCAGCGGGCGCCGC
TCGGCCGACGAGGCCCTGCCCTGCGTGGACTCCGACAACCTGGCGGGCGCCGCCGGGGCCGTGGCCCACCTGCTGGGACG
GGGCCGCCGGTCGGTGGCCACCATCACCGGGCCGCGGGACGTGTACGGGGCGCAGTGCCGGCTCGACGGCTACCGGCAGG
CCCTCGCCGCGGCCGGGCACGCCGTGGACGAGCAGCTGATCGCGGCGGGCGACTTCACCGAGGAGGGCGGCCGCAGGGCC
ATGCGGGAGCTGCTGGAGCGGCGCCCCGCCCTGGACGCCGTCTTCGCCGCCTCGGACGTCATGGCGGCGGGCGCCCGCCT
GGAGCTGCGCGCGGCGGGCCGCCGGATACCGCAGGACGTGGCGCTGGTGGGTTTCGACGACTCGGTGGTGGCCCGGCACA
TGGACCCGCCGCTGACCAGCGTGCGCCAGCCGATCGAGGAGATGGGCAGGACCATGGCGCGGCTGCTGCTGGAGCGGATC
GCGGGCGGGCCGGCGGACGCCGCCGTCGTGCTGCCGACCGAGCTGGTGGTCCGGGAGTCCTCCTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.685	98.827	0.372