Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   OG266_RS36785 Genome accession   NZ_CP107799
Coordinates   8335874..8336668 (+) Length   264 a.a.
NCBI ID   WP_371551034.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00554 strain NBC 00554     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 8330874..8341668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG266_RS36765 (OG266_36750) - 8332411..8332641 (+) 231 WP_371551029.1 hypothetical protein -
  OG266_RS36770 (OG266_36755) - 8332638..8333639 (+) 1002 WP_326724297.1 MoxR family ATPase -
  OG266_RS36775 (OG266_36760) - 8333636..8334586 (+) 951 WP_371551031.1 DUF58 domain-containing protein -
  OG266_RS36780 (OG266_36765) - 8334615..8335565 (+) 951 WP_371551032.1 VWA domain-containing protein -
  OG266_RS36785 (OG266_36770) htrA 8335874..8336668 (+) 795 WP_371551034.1 S1C family serine protease Regulator
  OG266_RS36790 (OG266_36775) - 8336713..8337381 (+) 669 WP_266467353.1 response regulator transcription factor -
  OG266_RS36795 (OG266_36780) - 8337450..8338658 (+) 1209 WP_371551036.1 sensor histidine kinase -
  OG266_RS36800 (OG266_36785) - 8338771..8339442 (-) 672 WP_266467359.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  OG266_RS36805 (OG266_36790) - 8339831..8340994 (+) 1164 WP_371551038.1 glycerophosphodiester phosphodiesterase -
  OG266_RS36810 (OG266_36795) - 8341069..8341575 (+) 507 WP_266824896.1 sigma-70 family RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 26176.03 Da        Isoelectric Point: 4.2248

>NTDB_id=646472 OG266_RS36785 WP_371551034.1 8335874..8336668(+) (htrA) [Streptomyces sp. NBC_00554 strain NBC 00554]
MPSPQTYASPAYATPPPPEQRAPRKPRPVLAAIVAAVLAGGAAGYAAGALGDSDDSSSSTAAQGTNGLEAVAARVLPSVV
SIETDAGQGSGFVFDERGRILTNAHVVSGSSQVTIELQDGRRLRADVLGDDPAHDVAVLEPETARGLEAAELATGARPGV
GDTVLAIGSPLGLSGTVTSGIVSALDRTVTLGEQGEQRRALQTDASINPGNSGGPLVDADGRVIGINTAIATLDQQGGGG
SIGIGFAIPVTDAMDAARAIIDGG

Nucleotide


Download         Length: 795 bp        

>NTDB_id=646472 OG266_RS36785 WP_371551034.1 8335874..8336668(+) (htrA) [Streptomyces sp. NBC_00554 strain NBC 00554]
ATGCCGTCGCCGCAGACGTACGCGTCGCCTGCGTACGCCACACCCCCGCCCCCGGAGCAACGCGCCCCGCGCAAACCCCG
CCCCGTCCTGGCCGCGATCGTCGCCGCCGTCCTCGCGGGCGGCGCGGCGGGCTACGCGGCCGGGGCGCTGGGAGACTCCG
ACGACTCCTCCTCCAGCACCGCCGCGCAGGGCACGAACGGGCTCGAAGCCGTCGCCGCTCGCGTTCTGCCCAGTGTCGTG
TCCATCGAGACGGACGCAGGCCAGGGTTCCGGCTTCGTCTTCGACGAGCGTGGCCGAATCCTCACCAACGCCCATGTGGT
GTCCGGCAGTTCGCAGGTCACCATAGAACTCCAGGACGGCCGCAGGCTGCGCGCCGACGTACTCGGGGACGATCCCGCCC
ACGACGTCGCCGTCCTCGAACCCGAGACGGCACGCGGACTGGAGGCCGCCGAACTGGCCACCGGCGCCCGGCCCGGAGTC
GGCGACACCGTCCTGGCCATCGGTTCCCCGCTCGGCCTCAGCGGCACCGTCACCTCCGGCATCGTGAGCGCCCTGGACCG
CACGGTGACACTGGGGGAGCAGGGCGAGCAGCGGCGCGCCCTGCAGACCGACGCGTCGATCAACCCGGGCAACTCCGGCG
GCCCCTTGGTCGATGCCGACGGCCGGGTCATCGGCATCAATACGGCCATCGCGACGTTGGACCAGCAGGGGGGCGGCGGC
TCCATCGGCATCGGTTTCGCCATTCCCGTGACGGACGCGATGGACGCCGCGCGGGCGATCATCGACGGCGGCTGA

Domains

Predicted by InterProScan.

Trypsin-like peptidase domain (Trypsin_2)

(89-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

35.424

100

0.364