Detailed information NTG0646339

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: L0961_RS17990
• Genome accession: NZ_CP090905
• Coordinates: 3611928..3613073 (+)
• Length: 381 a.a.
• NCBI ID: WP_234949492.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Yao
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3606928..3618073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L0961_RS17970 (L0961_17970)	-	3607403..3608119 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
L0961_RS17975 (L0961_17975)	narK	3608217..3609407 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
L0961_RS17980 (L0961_17980)	argS	3609541..3611211 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
L0961_RS17985 (L0961_17985)	-	3611208..3611636 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
L0961_RS17990 (L0961_17990)	rapF	3611928..3613073 (+)	1146	WP_234949492.1	aspartate phosphatase	Regulator
L0961_RS17995 (L0961_17995)	-	3613057..3613176 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
L0961_RS18000 (L0961_18000)	speB	3613299..3614171 (-)	873	WP_003151054.1	agmatinase	-
L0961_RS18005 (L0961_18005)	speE	3614231..3615061 (-)	831	WP_003151052.1	spermidine synthase	-
L0961_RS18010 (L0961_18010)	-	3615261..3617333 (+)	2073	WP_048367772.1	transglycosylase domain-containing protein	-
L0961_RS18015 (L0961_18015)	-	3617357..3617788 (-)	432	WP_103695198.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45710.23 Da
• Isoelectric Point: 5.1522

>NTDB_id=646339 L0961_RS17990 WP_234949492.1 3611928..3613073(+) (rapF) [Bacillus velezensis strain Yao]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAGLEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=646339 L0961_RS17990 WP_234949492.1 3611928..3613073(+) (rapF) [Bacillus velezensis strain Yao]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGGAT
TGGAACAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGCATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533