Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHA33_RS18070 Genome accession   NZ_CP107791
Coordinates   4050632..4051756 (+) Length   374 a.a.
NCBI ID   WP_030972387.1    Uniprot ID   A0ABV2U8C8
Organism   Streptomyces sp. NBC_00562     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4045632..4056756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA33_RS18055 (OHA33_18090) - 4046212..4047081 (+) 870 WP_267004539.1 hypothetical protein -
  OHA33_RS18060 (OHA33_18095) - 4047113..4048897 (-) 1785 WP_330245146.1 hypothetical protein -
  OHA33_RS18065 (OHA33_18100) radA/sms 4049139..4050551 (+) 1413 WP_326604438.1 DNA repair protein RadA Machinery gene
  OHA33_RS18070 (OHA33_18105) disA 4050632..4051756 (+) 1125 WP_030972387.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA33_RS18075 (OHA33_18110) - 4051911..4052648 (-) 738 WP_330245147.1 hypothetical protein -
  OHA33_RS18080 (OHA33_18115) - 4053072..4053365 (-) 294 WP_330245148.1 hypothetical protein -
  OHA33_RS18085 (OHA33_18120) - 4053362..4054570 (-) 1209 WP_330242671.1 IS110 family transposase -
  OHA33_RS18090 (OHA33_18125) - 4055103..4056005 (+) 903 WP_326629355.1 A/G-specific adenine glycosylase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40389.30 Da        Isoelectric Point: 4.8644

>NTDB_id=646266 OHA33_RS18070 WP_030972387.1 4050632..4051756(+) (disA) [Streptomyces sp. NBC_00562]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646266 OHA33_RS18070 WP_030972387.1 4050632..4051756(+) (disA) [Streptomyces sp. NBC_00562]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATTCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCATCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGTGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATATGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAGCTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
AGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGTTTCCGGTTGCTGGCGAAGGTGCCGCGACTCCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCTCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433