Detailed information NTG0645914

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OHN38_RS41470
• Genome accession: NZ_CP107765
• Coordinates: 9043504..9044529 (+)
• Length: 341 a.a.
• NCBI ID: WP_242712106.1
• Uniprot ID: A0ABS9XPU4
• Organism: Streptomyces sp. NBC_00588
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 9038504..9049529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHN38_RS41440 (OHN38_41410)	-	9038741..9039271 (-)	531	WP_242712112.1	hypothetical protein	-
OHN38_RS41445 (OHN38_41415)	-	9039358..9040007 (+)	650	Protein_8200	HD domain-containing protein	-
OHN38_RS41450 (OHN38_41420)	-	9040061..9040759 (-)	699	WP_242712110.1	aspartate/glutamate racemase family protein	-
OHN38_RS41455 (OHN38_41425)	-	9041219..9041446 (-)	228	WP_242712109.1	aminotransferase class V-fold PLP-dependent enzyme	-
OHN38_RS41460 (OHN38_41430)	-	9041551..9041772 (+)	222	WP_242712108.1	hypothetical protein	-
OHN38_RS41465 (OHN38_41435)	-	9041905..9043101 (-)	1197	WP_242712107.1	exo-alpha-sialidase	-
OHN38_RS41470 (OHN38_41440)	cytR	9043504..9044529 (+)	1026	WP_242712106.1	LacI family DNA-binding transcriptional regulator	Regulator
OHN38_RS41475 (OHN38_41445)	dmpG	9044867..9045880 (-)	1014	WP_242712105.1	4-hydroxy-2-oxovalerate aldolase	-
OHN38_RS41480 (OHN38_41450)	-	9045877..9046824 (-)	948	WP_242712104.1	acetaldehyde dehydrogenase (acetylating)	-
OHN38_RS41485 (OHN38_41455)	-	9046817..9047659 (-)	843	WP_330285009.1	fumarylacetoacetate hydrolase family protein	-
OHN38_RS41490 (OHN38_41460)	-	9047765..9048493 (+)	729	WP_330285364.1	IclR family transcriptional regulator	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36926.17 Da
• Isoelectric Point: 6.7253

>NTDB_id=645914 OHN38_RS41470 WP_242712106.1 9043504..9044529(+) (cytR) [Streptomyces sp. NBC_00588]
MAGARLKDVAERAGVSIKTVSNVVRGEARVAEQTRQRVLRAVAELGYQPNASARHLRTGRSGIIALAVPELVAPYFAELA
AEVIAAAKKRGCTVLIEDTGGDPEEELRIACGLSDPLIDGVLLSPLRLDETVLANRGRRVPLVLLGEQSYKIPADHVLID
NSAAAREATEHLLRIGRRRIGVIGQPPDRAHATTVQRMHGYLTALHAAGVPHDPRLVPETHKFTRADGAAAMRALLALEE
PPDAVFCFSDLLASGAMRAAYEHRLRVPGDLAIVGFDDIQESRYSVPSLTTVSPDRREIAELAVGAVLDRITHEAEAPYT
RLTAGYELVVRESTDPHIRET

Nucleotide

• Length: 1026 bp

>NTDB_id=645914 OHN38_RS41470 WP_242712106.1 9043504..9044529(+) (cytR) [Streptomyces sp. NBC_00588]
ATGGCAGGCGCTCGTCTCAAAGACGTGGCCGAGCGCGCCGGCGTGTCGATCAAGACCGTCTCGAACGTCGTCCGGGGCGA
GGCCCGTGTCGCGGAGCAGACCCGGCAGCGGGTCCTGCGCGCCGTAGCTGAACTCGGCTATCAGCCCAACGCCTCGGCGC
GTCATCTGCGCACCGGTCGCAGCGGCATTATCGCGCTGGCGGTTCCCGAACTGGTCGCGCCGTACTTCGCGGAGCTCGCC
GCGGAAGTCATCGCGGCGGCCAAGAAACGCGGTTGCACCGTACTCATCGAGGACACCGGCGGCGACCCGGAGGAGGAACT
GCGCATCGCCTGCGGGCTCAGCGACCCCCTCATCGACGGCGTGCTCCTCAGCCCGCTGCGCCTCGACGAGACGGTGCTCG
CCAACCGCGGGCGCCGAGTTCCCCTCGTACTCCTGGGCGAGCAGTCCTACAAGATTCCCGCGGACCACGTACTGATCGAC
AACTCCGCTGCCGCGCGGGAGGCGACTGAGCATCTGCTGCGGATCGGGCGGCGGCGCATCGGTGTCATCGGCCAGCCGCC
GGACCGGGCCCACGCGACCACCGTGCAGCGCATGCATGGCTACCTCACCGCACTGCATGCCGCAGGCGTGCCGCACGACC
CCCGACTCGTCCCGGAGACCCACAAGTTCACCCGGGCCGACGGCGCCGCCGCCATGCGGGCACTTCTGGCACTGGAGGAA
CCGCCCGACGCGGTCTTCTGCTTCAGCGATCTGCTCGCCTCCGGCGCGATGCGTGCCGCGTACGAACACCGGCTGCGGGT
GCCGGGCGATCTGGCGATCGTCGGATTCGACGACATCCAGGAAAGCCGTTACAGCGTGCCGTCACTGACCACGGTCTCGC
CGGACAGACGGGAGATCGCCGAGTTGGCGGTCGGCGCCGTCCTCGACAGGATCACCCACGAGGCGGAGGCTCCGTACACG
CGGCTCACTGCGGGGTACGAACTGGTGGTGCGGGAAAGCACGGATCCACACATCCGCGAGACGTAG

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (6-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (169-334)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	38.988	98.534	0.384
cytR	Vibrio parahaemolyticus RIMD 2210633	38.279	98.827	0.378