Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SPB_RS05850 Genome accession   NZ_AEUT02000001
Coordinates   1171624..1172349 (-) Length   241 a.a.
NCBI ID   WP_003105648.1    Uniprot ID   A0A0E2UCE4
Organism   Streptococcus parauberis NCFD 2020     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1166624..1177349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPB_RS05815 (SPB_1205) - 1166667..1166963 (-) 297 WP_003104517.1 RNase P modulator RnpM -
  SPB_RS05820 (SPB_1206) nusA 1166979..1168133 (-) 1155 WP_037621358.1 transcription termination factor NusA -
  SPB_RS05825 (SPB_1207) rimP 1168222..1168704 (-) 483 WP_003102760.1 ribosome maturation factor RimP -
  SPB_RS05835 (SPB_1209) trmB 1169100..1169735 (-) 636 WP_003102841.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPB_RS05840 (SPB_1210) ccrZ 1169735..1170526 (-) 792 WP_003103774.1 cell cycle regulator CcrZ -
  SPB_RS05845 (SPB_1211) - 1170587..1171621 (-) 1035 WP_003104381.1 ABC transporter permease -
  SPB_RS05850 (SPB_1212) pptA 1171624..1172349 (-) 726 WP_003105648.1 ABC transporter ATP-binding protein Regulator
  SPB_RS05855 (SPB_1213) - 1172611..1173030 (+) 420 WP_003103589.1 HIT family protein -
  SPB_RS05860 (SPB_1214) - 1173027..1173329 (+) 303 WP_003104696.1 hypothetical protein -
  SPB_RS05865 (SPB_1215) - 1173362..1174651 (-) 1290 WP_003106134.1 LCP family protein -
  SPB_RS05870 (SPB_1216) - 1174660..1175184 (-) 525 WP_003102412.1 GNAT family N-acetyltransferase -
  SPB_RS05875 (SPB_1217) tsaE 1175171..1175620 (-) 450 WP_003103132.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPB_RS05880 (SPB_1218) - 1175709..1177169 (-) 1461 WP_003104259.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26876.31 Da        Isoelectric Point: 5.6444

>NTDB_id=64547 SPB_RS05850 WP_003105648.1 1171624..1172349(-) (pptA) [Streptococcus parauberis NCFD 2020]
MLKIENLTGGYINIPVLKDISFSVDAGQLVGLIGLNGAGKSTTINEIIGLLRPYKGSITIDGISLIDDKTAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIPVKEAHDRAKPLLKTYRLEDKLDWYPVHFSKGMKQKVMIICAFIIDPRLFILDEPF
LGLDPLAIADLIAYLDEEKKKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLDDLRTAFGDNQASLNDIYLALTKE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=64547 SPB_RS05850 WP_003105648.1 1171624..1172349(-) (pptA) [Streptococcus parauberis NCFD 2020]
ATGTTAAAAATTGAAAATCTGACAGGTGGTTATATTAATATCCCTGTTTTGAAGGACATTTCTTTTTCCGTTGATGCTGG
TCAATTAGTAGGATTAATTGGTTTGAATGGTGCAGGAAAATCAACGACAATCAATGAAATAATTGGTTTGTTAAGACCTT
ATAAAGGTAGCATTACCATTGATGGCATCTCCTTGATAGATGACAAAACAGCCTACAGGAAGAAAATTGGCTTTATACCC
GAAACACCAAGTCTTTACGAAGAATTGACCTTGGCTGAACACATTGAAACAATTGCCATGGCTTACGACATTCCAGTAAA
AGAAGCACATGATCGAGCAAAACCTTTATTGAAAACATATCGTTTGGAGGATAAATTGGATTGGTATCCCGTTCATTTTT
CTAAAGGAATGAAACAAAAAGTAATGATTATCTGTGCTTTTATTATTGATCCTAGGTTATTTATTCTAGATGAACCATTC
CTTGGCTTAGATCCGTTAGCAATTGCTGACTTAATTGCCTATTTGGACGAGGAAAAAAAGAAAGGCAAGTCAATTTTGAT
GAGTACACACGTTCTCGATTCTGCAGAAAAAATGTGTGATCGGTTTGTCATTTTACATCATGGACAAATCCGTGCCCAAG
GGACTTTGGACGATTTACGAACTGCATTTGGTGATAACCAGGCTAGTCTAAATGATATATACTTAGCCTTGACCAAAGAG
GCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2UCE4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

Multiple sequence alignment