Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | L1A06_RS12930 | Genome accession | NZ_CP090877 |
| Coordinates | 2583044..2583343 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain SAUR_BFS11 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2578044..2588343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1A06_RS12905 (L1A06_12905) | - | 2578621..2580267 (+) | 1647 | WP_000277718.1 | IS1182 family transposase | - |
| L1A06_RS12910 (L1A06_12910) | comGA | 2580292..2581266 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| L1A06_RS12915 (L1A06_12915) | comGB | 2581238..2582308 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| L1A06_RS12920 (L1A06_12920) | comGC | 2582322..2582633 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| L1A06_RS12925 (L1A06_12925) | comGD | 2582611..2583057 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| L1A06_RS12930 (L1A06_12930) | comGE | 2583044..2583343 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| L1A06_RS12935 (L1A06_12935) | comGF | 2583261..2583758 (+) | 498 | WP_029642894.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| L1A06_RS12940 (L1A06_12940) | - | 2583855..2584001 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| L1A06_RS12945 (L1A06_12945) | - | 2583991..2584515 (+) | 525 | WP_001015123.1 | shikimate kinase | - |
| L1A06_RS12950 (L1A06_12950) | gcvT | 2584674..2585765 (+) | 1092 | WP_000093348.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| L1A06_RS12955 (L1A06_12955) | gcvPA | 2585785..2587131 (+) | 1347 | WP_000019689.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=645454 L1A06_RS12930 WP_000844413.1 2583044..2583343(+) (comGE) [Staphylococcus aureus strain SAUR_BFS11]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=645454 L1A06_RS12930 WP_000844413.1 2583044..2583343(+) (comGE) [Staphylococcus aureus strain SAUR_BFS11]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |