Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | SPB_RS04785 | Genome accession | NZ_AEUT02000001 |
| Coordinates | 953199..955484 (+) | Length | 761 a.a. |
| NCBI ID | WP_003102350.1 | Uniprot ID | A0AAE4HVS5 |
| Organism | Streptococcus parauberis NCFD 2020 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 948199..960484
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPB_RS11010 | - | 948270..948404 (-) | 135 | WP_003107303.1 | FeoB-associated Cys-rich membrane protein | - |
| SPB_RS04760 (SPB_0983) | feoB | 948404..950557 (-) | 2154 | WP_003105786.1 | ferrous iron transport protein B | - |
| SPB_RS04765 (SPB_0984) | - | 950575..951033 (-) | 459 | WP_003105762.1 | ferrous iron transport protein A | - |
| SPB_RS04770 (SPB_0985) | - | 951145..951879 (-) | 735 | WP_003102516.1 | amino acid ABC transporter ATP-binding protein | - |
| SPB_RS04775 (SPB_0986) | - | 951876..952565 (-) | 690 | WP_003103587.1 | amino acid ABC transporter permease | - |
| SPB_RS04780 (SPB_0987) | - | 952689..952919 (-) | 231 | WP_003105222.1 | DUF1797 family protein | - |
| SPB_RS04785 (SPB_0988) | clpE | 953199..955484 (+) | 2286 | WP_003102350.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SPB_RS04790 (SPB_0989) | - | 955603..956052 (+) | 450 | WP_003103112.1 | NUDIX hydrolase | - |
| SPB_RS04795 (SPB_0990) | - | 956101..956409 (+) | 309 | WP_003104079.1 | DUF1827 family protein | - |
| SPB_RS04800 (SPB_0991) | ileS | 956475..959270 (-) | 2796 | WP_003105723.1 | isoleucine--tRNA ligase | - |
| SPB_RS04805 | - | 959527..960291 (-) | 765 | WP_003107309.1 | DivIVA domain-containing protein | - |
Sequence
Protein
Download Length: 761 a.a. Molecular weight: 84898.08 Da Isoelectric Point: 4.9368
>NTDB_id=64542 SPB_RS04785 WP_003102350.1 953199..955484(+) (clpE) [Streptococcus parauberis NCFD 2020]
MLCQNCQLNEASIHLYTNVNGKQKQIDLCQNCYQIMKTDANNSILGGIGSRSEKKQDPMNPFFDDFFGDLNNFRSFGNLP
NTPPTQAGGNGGNNGKIPNQQGSRNQNAQATQQPKGLLEEFGINVTEIARKGGIDPVIGRDEEITRVIEILNRRTKNNPV
LIGEPGVGKTAVVEGLAQKIVDSDVPYKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRQDVILFIDEIHEIV
GAGNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQTKYEDYHHVK
YTDDAIIAAATLSNRYIQDRFLPDKAIDLLDEAGSKLNLTLTFVDPKEIDQRLVEAENLKAQATRDEDYERAAYFRDQII
KYKELQKQKVDEEDTPIITEKTIEGILEDKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLGT
PNRPIGSFLFVGPTGVGKTELSKQLAIELFGTADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSL
ILLDEIEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTSTNEASVGFGAAREGRTSSVLGQLTNFFNPE
FMNRFDGIIEFQTLSKDNLLHIVDLMLEDVNNRLSQNGLHLDVTNKVKEKLVDLGYNPKMGARPLRRTIQDYIEDAITDF
YLENPSEKELKAMMTSNGNIIIKSAKKSNSPVEDQTKSYEN
MLCQNCQLNEASIHLYTNVNGKQKQIDLCQNCYQIMKTDANNSILGGIGSRSEKKQDPMNPFFDDFFGDLNNFRSFGNLP
NTPPTQAGGNGGNNGKIPNQQGSRNQNAQATQQPKGLLEEFGINVTEIARKGGIDPVIGRDEEITRVIEILNRRTKNNPV
LIGEPGVGKTAVVEGLAQKIVDSDVPYKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRQDVILFIDEIHEIV
GAGNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQTKYEDYHHVK
YTDDAIIAAATLSNRYIQDRFLPDKAIDLLDEAGSKLNLTLTFVDPKEIDQRLVEAENLKAQATRDEDYERAAYFRDQII
KYKELQKQKVDEEDTPIITEKTIEGILEDKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLGT
PNRPIGSFLFVGPTGVGKTELSKQLAIELFGTADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSL
ILLDEIEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTSTNEASVGFGAAREGRTSSVLGQLTNFFNPE
FMNRFDGIIEFQTLSKDNLLHIVDLMLEDVNNRLSQNGLHLDVTNKVKEKLVDLGYNPKMGARPLRRTIQDYIEDAITDF
YLENPSEKELKAMMTSNGNIIIKSAKKSNSPVEDQTKSYEN
Nucleotide
Download Length: 2286 bp
>NTDB_id=64542 SPB_RS04785 WP_003102350.1 953199..955484(+) (clpE) [Streptococcus parauberis NCFD 2020]
ATGCTCTGTCAGAATTGTCAATTAAATGAAGCTTCAATCCATTTATATACCAATGTTAATGGGAAACAAAAGCAAATTGA
TTTATGTCAAAATTGCTATCAAATAATGAAAACGGATGCGAATAATTCAATATTAGGGGGAATTGGTTCGCGTTCAGAAA
AAAAACAAGACCCAATGAATCCATTCTTTGATGACTTTTTCGGTGATTTGAATAACTTTCGATCTTTCGGAAATCTACCT
AATACTCCTCCAACTCAGGCAGGTGGAAACGGTGGAAATAATGGGAAAATTCCTAACCAACAGGGCTCTCGTAATCAAAA
TGCACAAGCTACTCAACAGCCTAAAGGCTTACTAGAAGAGTTTGGTATCAATGTTACGGAAATTGCCCGTAAAGGAGGTA
TTGACCCTGTTATAGGTCGTGACGAAGAGATTACACGTGTCATTGAAATTCTCAATCGTCGTACAAAGAATAATCCAGTT
CTAATTGGCGAACCCGGTGTTGGTAAAACTGCTGTCGTTGAAGGTTTAGCTCAAAAAATTGTGGACAGTGATGTCCCATA
TAAACTTCAAGGTAAACAAGTGATTCGTTTAGATGTTGTTAGTTTAGTCCAAGGAACTGGAATCCGTGGTCAATTTGAAG
AACGAATGCAAAAACTGATGGAAGAAATAAGAAACCGTCAAGATGTTATCTTATTCATTGATGAAATTCACGAAATTGTT
GGAGCCGGTAATGCAGGTGATGGCAACATGGACGCTGGAAATATCTTAAAACCTGCTCTTGCTCGTGGTGAATTACAGTT
AGTTGGTGCTACTACACTTAATGAGTATCGAATTATTGAGAAAGATGCCGCCTTAGAACGACGTATGCAACCTGTTAAGG
TTGATGAGCCTTCTGTTGAAGAAACAATTACCATCTTAAAAGGGATCCAGACTAAGTACGAAGATTATCATCATGTTAAG
TATACAGATGATGCTATCATTGCTGCTGCGACACTTTCTAATCGATATATTCAAGATCGCTTCCTTCCAGACAAAGCAAT
TGACTTACTCGATGAAGCCGGCTCAAAATTGAACTTGACGTTAACTTTTGTTGATCCAAAAGAAATAGATCAACGTCTTG
TCGAAGCCGAAAATTTAAAAGCGCAGGCTACACGAGATGAAGACTATGAGCGCGCAGCTTATTTCCGCGACCAAATTATC
AAATATAAAGAGTTACAAAAGCAAAAAGTTGATGAAGAAGATACCCCAATCATTACTGAGAAAACAATTGAAGGTATCTT
AGAGGACAAAACCAATATCCCTGTGGGTGATTTGAAAGAAAAAGAACAATCACAATTGATTCACCTGGCTGAAGACTTGA
AGAGTCATGTCATTGGTCAAGACGATGCTGTTGATAAAATTGCTAAAGCTATTCGTCGTAACCGGGTCGGTCTAGGTACG
CCAAATCGACCAATCGGTTCATTCTTATTCGTGGGTCCTACAGGTGTAGGGAAAACTGAGTTATCTAAGCAATTAGCAAT
TGAACTTTTTGGCACAGCCGATAATATGATTCGTTTTGATATGTCAGAGTACATGGAAAAACATGCCGTTGCTAAGTTGG
TTGGTGCCCCTCCTGGCTATGTCGGATATGAGGAAGCCGGTCAATTAACGGAAAAAGTCCGTCGCAATCCTTATTCACTC
ATTTTGCTGGATGAAATTGAAAAAGCTCACCCTGATGTTATGCACATGTTCCTTCAAGTTTTAGACGATGGTCGTTTGAC
TGATGGGCAAGGCCGGACAGTTAGCTTTAAAGATACCATCATCATTATGACTTCTAATGCCGGGACAAGTACTAATGAAG
CCTCTGTCGGATTTGGGGCAGCCCGCGAAGGACGAACAAGTTCAGTTCTGGGACAATTAACAAATTTCTTTAATCCAGAA
TTTATGAACCGTTTTGATGGTATTATTGAATTCCAAACATTAAGCAAAGATAATCTATTACATATTGTTGATTTGATGTT
AGAAGATGTCAACAATCGCCTCTCTCAAAATGGCCTTCACCTTGATGTGACCAATAAAGTTAAAGAGAAATTAGTCGATC
TTGGTTATAATCCAAAAATGGGTGCTCGTCCATTAAGAAGAACTATTCAAGATTACATTGAAGATGCTATTACTGATTTC
TACTTGGAAAATCCTAGTGAAAAAGAGCTTAAAGCAATGATGACTAGTAATGGAAATATCATTATTAAATCAGCAAAAAA
ATCTAATTCCCCTGTGGAAGATCAAACCAAGTCTTACGAAAATTAA
ATGCTCTGTCAGAATTGTCAATTAAATGAAGCTTCAATCCATTTATATACCAATGTTAATGGGAAACAAAAGCAAATTGA
TTTATGTCAAAATTGCTATCAAATAATGAAAACGGATGCGAATAATTCAATATTAGGGGGAATTGGTTCGCGTTCAGAAA
AAAAACAAGACCCAATGAATCCATTCTTTGATGACTTTTTCGGTGATTTGAATAACTTTCGATCTTTCGGAAATCTACCT
AATACTCCTCCAACTCAGGCAGGTGGAAACGGTGGAAATAATGGGAAAATTCCTAACCAACAGGGCTCTCGTAATCAAAA
TGCACAAGCTACTCAACAGCCTAAAGGCTTACTAGAAGAGTTTGGTATCAATGTTACGGAAATTGCCCGTAAAGGAGGTA
TTGACCCTGTTATAGGTCGTGACGAAGAGATTACACGTGTCATTGAAATTCTCAATCGTCGTACAAAGAATAATCCAGTT
CTAATTGGCGAACCCGGTGTTGGTAAAACTGCTGTCGTTGAAGGTTTAGCTCAAAAAATTGTGGACAGTGATGTCCCATA
TAAACTTCAAGGTAAACAAGTGATTCGTTTAGATGTTGTTAGTTTAGTCCAAGGAACTGGAATCCGTGGTCAATTTGAAG
AACGAATGCAAAAACTGATGGAAGAAATAAGAAACCGTCAAGATGTTATCTTATTCATTGATGAAATTCACGAAATTGTT
GGAGCCGGTAATGCAGGTGATGGCAACATGGACGCTGGAAATATCTTAAAACCTGCTCTTGCTCGTGGTGAATTACAGTT
AGTTGGTGCTACTACACTTAATGAGTATCGAATTATTGAGAAAGATGCCGCCTTAGAACGACGTATGCAACCTGTTAAGG
TTGATGAGCCTTCTGTTGAAGAAACAATTACCATCTTAAAAGGGATCCAGACTAAGTACGAAGATTATCATCATGTTAAG
TATACAGATGATGCTATCATTGCTGCTGCGACACTTTCTAATCGATATATTCAAGATCGCTTCCTTCCAGACAAAGCAAT
TGACTTACTCGATGAAGCCGGCTCAAAATTGAACTTGACGTTAACTTTTGTTGATCCAAAAGAAATAGATCAACGTCTTG
TCGAAGCCGAAAATTTAAAAGCGCAGGCTACACGAGATGAAGACTATGAGCGCGCAGCTTATTTCCGCGACCAAATTATC
AAATATAAAGAGTTACAAAAGCAAAAAGTTGATGAAGAAGATACCCCAATCATTACTGAGAAAACAATTGAAGGTATCTT
AGAGGACAAAACCAATATCCCTGTGGGTGATTTGAAAGAAAAAGAACAATCACAATTGATTCACCTGGCTGAAGACTTGA
AGAGTCATGTCATTGGTCAAGACGATGCTGTTGATAAAATTGCTAAAGCTATTCGTCGTAACCGGGTCGGTCTAGGTACG
CCAAATCGACCAATCGGTTCATTCTTATTCGTGGGTCCTACAGGTGTAGGGAAAACTGAGTTATCTAAGCAATTAGCAAT
TGAACTTTTTGGCACAGCCGATAATATGATTCGTTTTGATATGTCAGAGTACATGGAAAAACATGCCGTTGCTAAGTTGG
TTGGTGCCCCTCCTGGCTATGTCGGATATGAGGAAGCCGGTCAATTAACGGAAAAAGTCCGTCGCAATCCTTATTCACTC
ATTTTGCTGGATGAAATTGAAAAAGCTCACCCTGATGTTATGCACATGTTCCTTCAAGTTTTAGACGATGGTCGTTTGAC
TGATGGGCAAGGCCGGACAGTTAGCTTTAAAGATACCATCATCATTATGACTTCTAATGCCGGGACAAGTACTAATGAAG
CCTCTGTCGGATTTGGGGCAGCCCGCGAAGGACGAACAAGTTCAGTTCTGGGACAATTAACAAATTTCTTTAATCCAGAA
TTTATGAACCGTTTTGATGGTATTATTGAATTCCAAACATTAAGCAAAGATAATCTATTACATATTGTTGATTTGATGTT
AGAAGATGTCAACAATCGCCTCTCTCAAAATGGCCTTCACCTTGATGTGACCAATAAAGTTAAAGAGAAATTAGTCGATC
TTGGTTATAATCCAAAAATGGGTGCTCGTCCATTAAGAAGAACTATTCAAGATTACATTGAAGATGCTATTACTGATTTC
TACTTGGAAAATCCTAGTGAAAAAGAGCTTAAAGCAATGATGACTAGTAATGGAAATATCATTATTAAATCAGCAAAAAA
ATCTAATTCCCCTGTGGAAGATCAAACCAAGTCTTACGAAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
84.079 |
99.869 |
0.84 |
| clpE | Streptococcus pneumoniae Rx1 |
83.69 |
98.292 |
0.823 |
| clpE | Streptococcus pneumoniae D39 |
83.69 |
98.292 |
0.823 |
| clpE | Streptococcus pneumoniae R6 |
83.69 |
98.292 |
0.823 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.556 |
98.292 |
0.821 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
74.735 |
99.343 |
0.742 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.613 |
85.545 |
0.442 |
| clpC | Streptococcus pneumoniae D39 |
46.635 |
83.968 |
0.392 |
| clpC | Streptococcus pneumoniae Rx1 |
46.635 |
83.968 |
0.392 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.635 |
83.968 |
0.392 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.72 |
82.129 |
0.384 |
| clpC | Streptococcus mutans UA159 |
47.317 |
80.815 |
0.382 |
| clpC | Streptococcus thermophilus LMD-9 |
46.24 |
82.129 |
0.38 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.92 |
82.129 |
0.377 |