Detailed information NTG0645169

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: L0993_RS11580
• Genome accession: NZ_CP090845
• Coordinates: 2625897..2629286 (+)
• Length: 1129 a.a.
• NCBI ID: WP_137032357.1
• Uniprot ID: -
• Organism: Vibrio kanaloae strain WXL161
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2620897..2634286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L0993_RS11560 (L0993_11555)	erpA	2621197..2621538 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
L0993_RS11565 (L0993_11560)	hemL	2621824..2623119 (+)	1296	WP_060468550.1	glutamate-1-semialdehyde 2,1-aminomutase	-
L0993_RS11570 (L0993_11565)	-	2623463..2624548 (+)	1086	WP_060468551.1	AI-2E family transporter	-
L0993_RS11575 (L0993_11570)	rsmC	2624658..2625680 (+)	1023	WP_373937750.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
L0993_RS11580 (L0993_11575)	chiS	2625897..2629286 (+)	3390	WP_137032357.1	response regulator	Regulator
L0993_RS11585 (L0993_11580)	-	2630005..2631687 (+)	1683	WP_017056650.1	ABC transporter substrate-binding protein	-
L0993_RS11590 (L0993_11585)	-	2631857..2632843 (+)	987	WP_017056649.1	ABC transporter permease	-
L0993_RS11595 (L0993_11590)	-	2632846..2633871 (+)	1026	WP_017056648.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127324.91 Da
• Isoelectric Point: 5.3657

>NTDB_id=645169 L0993_RS11580 WP_137032357.1 2625897..2629286(+) (chiS) [Vibrio kanaloae strain WXL161]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESNSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLIDINGNVAYSVSKHDDYGTNLLTGKYKDSNLGTTFQQLKKDVTDRRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVEKALAGETAVGTFDNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVSSHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIRSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPSNQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLVQAGQDAG
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELQNYSKSGNYSHFQAPDLIDNTQQEDSVINENP
DGPLLVIADDEPVNLRVLDSFLKLEGFRVRTACDGPETIEIIEKEKPELLLLDIMMPGMSGYQVCETLRKQYDHAQLPII
MLTALNQAEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKIEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRIADKASGEGKNKQELMREVLVDAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=645169 L0993_RS11580 WP_137032357.1 2625897..2629286(+) (chiS) [Vibrio kanaloae strain WXL161]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACTCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTAATCGCAATATTCTTCCTCCAGTCGCACAGTCAAGATCTACAGGAACAAAGCACCTCACATCTTGTTT
CGGTTCGTGATACTAAGCAACAGCAAATCGTCGATTACCTTCAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTACGATCA
GAACTGGCTAATGCCAGTGGTGGGCGATTCTATGGATTGATCAATGCATTTCAAAGGCTCGGCCTAGACATTGACGAAGC
ACGTAGCAATGCACAGCAGCGTTATATTCAAGGATCAGGCGATCAAATCAAAACATCTATTCTTCCAGAATCGAACAGTT
TTATTGGCAGTGAGCGTTATCGCCTACTACACAAACGCTACCACAACGCTTACCTAGAACTGCTTAAGCGCTCTGATTTT
GACGATATCTTATTGATTGATATCAACGGTAACGTTGCTTATTCCGTATCTAAGCATGATGATTATGGCACCAATTTACT
GACAGGTAAGTACAAGGATTCAAACCTAGGCACTACCTTTCAACAACTAAAAAAAGACGTAACCGACCGACGCAAATCTA
ATGAGGATTACACGCCTGTTATTGTCTCTGACTTTAAAGACGAGAATGGTAAACAAACAGCATGGTTAGGTGCGCCTATC
GTACAGCAGGGCTATCTGCACAGCTATGCGATGTTTAGATTACCGATCAACGGCATAACGAAACTTATCGCGGATCTCAA
CAAGAGTTCAAATATTCAGACGCTGCTTGTGGGTGATGATCACCTGCCGCGTAGCCTTGCGCATTCGCAAGAATCGATCA
ACTTAAGCCTAGACGTTGTTGAAAAAGCGCTTGCGGGCGAAACTGCAGTGGGTACGTTCGATAACACTCAAGATCAAGCG
ATCATCGCTGCCTATACGCCAATTGAACTCAAATATGCAACTTGGGCTCTCGTTGTCGAGCTGCCAGAGAAAGAAGCATT
TGCCCGAATTCACCAGCTAGAAAAGATCTTCGTAATCGTAATGTTAACTGCAATCATTCTTGTATTTGTTTCATCGCATT
ACCTATCCAACTTCATCACATCGCCGCTCCTCAAACTCACTTGGGCAGCCGAGAAAGTATCTGCTGGTGATCTTGATGAA
ACGATGATCAATACCGAGCGAAAAGATGAGATAGGCCGCCTTGCCGTAAGCTTCGAACGAATGCAGCGCTCAATTCGCGA
AAAGATGCAGCTGATAAGAAGCCAGAATGATGAACTTGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
AACTGGCCAACAAACTTAAAGATGAGTTCTTAGCGACGACTTCACACGAACTTAGAACACCACTGCATGGGATGGTTGGT
ATTGCCGAAGCACTAATATCAGGTGCGAACGGTCCAATTCCATCTAACCAGAAATACCAGCTAGATATCATCATTAATAG
TGGTCAGAGACTAGCAACACTGGTTGATGACCTGCTTGATTACCACAAAATGCGCTACGGCAGCTTGGATATTAAGAAAT
CTGCGGTTGATCTGTCTGCAGCCACCAGCTTGGTGCTTGAGCTGTCACATCACCTGCTGGGTAGTAAACCAATCCGCATT
ATTAACCAAGTTCCTAGTGATTTGGGGCTAGTTTCATCTGACCCTCAACGCCTTGAGCAAGTGATGTATAACTTGGTCGG
TAATGCCATCAAGTACACATCAGAAGGTAAGATAGTCATCTCTGCAAGCGTTATTGACGACAACATTCGCGTGCAAGTTG
TTGATACCGGACAAGGTATACCCGCTGAGTATCTAGAGCACATCTTTGAACCCTTAGTTCAAGCAGGTCAAGATGCAGGC
AACTATCGTCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAACTGATTGAGCTTATGGGCGGGTCACTTTACGTAAG
TAGTCAACCGATGCTTGGCACTACCTTCAGCTTTACGCTACCTTTAGCTACGCAAGAAGAATTGCAGAACTACAGCAAGT
CTGGCAACTACTCACACTTTCAAGCTCCAGATTTAATTGATAATACTCAACAAGAAGACAGCGTTATCAATGAAAACCCT
GACGGCCCACTCTTAGTAATCGCAGATGATGAGCCAGTAAACCTAAGAGTATTAGACAGTTTCTTGAAGTTAGAAGGTTT
TCGAGTTCGTACCGCATGTGACGGCCCAGAAACCATTGAAATAATTGAAAAAGAGAAGCCTGAATTACTTCTACTCGACA
TCATGATGCCTGGTATGAGTGGCTACCAGGTTTGTGAGACACTGCGTAAACAATATGACCATGCACAGTTACCAATTATC
ATGCTTACGGCGCTTAACCAGGCAGAGGACCGAGTGCGAGGCTTCGAAGTCGGAGCCAACGATTACTTATCCAAGCCATT
CAACAAACAAGAGTTAGCCGCTCGAATTACTGCGCACCTATCAGCAAGCAAAGCTGAGCAAAGACGACTTGAAAATGACC
AACTGCAACTAGAGCTTAAACACAGAGCCATGGTTGAAGCTAATTTACTAGAGACACAAGGACGTTTACTAGAACAGTTA
GAATCAGCCCCTGAAGCCATTATATGTATTCGTGATGATCAACGTATTCGCTTCGCCAACGAAGCAGCAGCGAAACTCTT
TAGGCGTGGGCAAGAGCAACTTAAGCGTTCAATGGCTGACGAAATCATTGCTCCTAAGTACCTCAAAATAGAACAAGCCC
ACTACTGCGGTGATATTGATATCTACATAGATGACACACGTCAGCGTATTCCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTACATCTTCAATGTGGGTGGTGGCGTTAACTCAAACCGAGTCAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTCCAACAGCTGAAAGAGCTCGGAGGTGAGTTTACTC
GTATCGCAGATAAAGCGAGCGGTGAAGGTAAAAATAAACAGGAATTAATGCGTGAAGTATTGGTTGATGCGATGACCAAT
GCCATCATTTACTGGGAATCAGTAACAGGTGAAACTAAGTTTGCCTTCGCAGAGAAAAGTGGCTTGTGGCGTGTCTACTT
AGACCGAAGTACACTTCAGACTCGAACACTAGACAAATACCTACGCGTAGAAACCCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTGAGCTCAATCGAATTCATACTGGAACACTGCAAAGAACAGACGCCAGAAAGAACCCACATTGAGATGCTAAGG
GATAAACTTCAGAAACTACTGACCAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• PAS domain (PAS_8) (880-914)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.642	100	0.756