Detailed information NTG0645125

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: L0990_RS11585
• Genome accession: NZ_CP090843
• Coordinates: 2625886..2629275 (+)
• Length: 1129 a.a.
• NCBI ID: WP_137032357.1
• Uniprot ID: -
• Organism: Vibrio kanaloae strain A6-11SW3
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2620886..2634275

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L0990_RS11565 (L0990_11560)	erpA	2621186..2621527 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
L0990_RS11570 (L0990_11565)	hemL	2621813..2623108 (+)	1296	WP_060468550.1	glutamate-1-semialdehyde 2,1-aminomutase	-
L0990_RS11575 (L0990_11570)	-	2623452..2624537 (+)	1086	WP_060468551.1	AI-2E family transporter	-
L0990_RS11580 (L0990_11575)	rsmC	2624647..2625669 (+)	1023	WP_373937750.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
L0990_RS11585 (L0990_11580)	chiS	2625886..2629275 (+)	3390	WP_137032357.1	response regulator	Regulator
L0990_RS11590 (L0990_11585)	-	2629994..2631676 (+)	1683	WP_017056650.1	ABC transporter substrate-binding protein	-
L0990_RS11595 (L0990_11590)	-	2631846..2632832 (+)	987	WP_017056649.1	ABC transporter permease	-
L0990_RS11600 (L0990_11595)	-	2632835..2633860 (+)	1026	WP_017056648.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127324.91 Da
• Isoelectric Point: 5.3657

>NTDB_id=645125 L0990_RS11585 WP_137032357.1 2625886..2629275(+) (chiS) [Vibrio kanaloae strain A6-11SW3]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESNSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLIDINGNVAYSVSKHDDYGTNLLTGKYKDSNLGTTFQQLKKDVTDRRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVEKALAGETAVGTFDNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVSSHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIRSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPSNQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLVQAGQDAG
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELQNYSKSGNYSHFQAPDLIDNTQQEDSVINENP
DGPLLVIADDEPVNLRVLDSFLKLEGFRVRTACDGPETIEIIEKEKPELLLLDIMMPGMSGYQVCETLRKQYDHAQLPII
MLTALNQAEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKIEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRIADKASGEGKNKQELMREVLVDAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=645125 L0990_RS11585 WP_137032357.1 2625886..2629275(+) (chiS) [Vibrio kanaloae strain A6-11SW3]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACTCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTAATCGCAATATTCTTCCTCCAGTCGCACAGTCAAGATCTACAGGAACAAAGCACCTCACATCTTGTTT
CGGTTCGTGATACTAAGCAACAGCAAATCGTCGATTACCTTCAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTACGATCA
GAACTGGCTAATGCCAGTGGTGGGCGATTCTATGGATTGATCAATGCATTTCAAAGGCTCGGCCTAGACATTGACGAAGC
ACGTAGCAATGCACAGCAGCGTTATATTCAAGGATCAGGCGATCAAATCAAAACATCTATTCTTCCAGAATCGAACAGTT
TTATTGGCAGTGAGCGTTATCGCCTACTACACAAACGCTACCACAACGCTTACCTAGAACTGCTTAAGCGCTCTGATTTT
GACGATATCTTATTGATTGATATCAACGGTAACGTTGCTTATTCCGTATCTAAGCATGATGATTATGGCACCAATTTACT
GACAGGTAAGTACAAGGATTCAAACCTAGGCACTACCTTTCAACAACTAAAAAAAGACGTAACCGACCGACGCAAATCTA
ATGAGGATTACACGCCTGTTATTGTCTCTGACTTTAAAGACGAGAATGGTAAACAAACAGCATGGTTAGGTGCGCCTATC
GTACAGCAGGGCTATCTGCACAGCTATGCGATGTTTAGATTACCGATCAACGGCATAACGAAACTTATCGCGGATCTCAA
CAAGAGTTCAAATATTCAGACGCTGCTTGTGGGTGATGATCACCTGCCGCGTAGCCTTGCGCATTCGCAAGAATCGATCA
ACTTAAGCCTAGACGTTGTTGAAAAAGCGCTTGCGGGCGAAACTGCAGTGGGTACGTTCGATAACACTCAAGATCAAGCG
ATCATCGCTGCCTATACGCCAATTGAACTCAAATATGCAACTTGGGCTCTCGTTGTCGAGCTGCCAGAGAAAGAAGCATT
TGCCCGAATTCACCAGCTAGAAAAGATCTTCGTAATCGTAATGTTAACTGCAATCATTCTTGTATTTGTTTCATCGCATT
ACCTATCCAACTTCATCACATCGCCGCTCCTCAAACTCACTTGGGCAGCCGAGAAAGTATCTGCTGGTGATCTTGATGAA
ACGATGATCAATACCGAGCGAAAAGATGAGATAGGCCGCCTTGCCGTAAGCTTCGAACGAATGCAGCGCTCAATTCGCGA
AAAGATGCAGCTGATAAGAAGCCAGAATGATGAACTTGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
AACTGGCCAACAAACTTAAAGATGAGTTCTTAGCGACGACTTCACACGAACTTAGAACACCACTGCATGGGATGGTTGGT
ATTGCCGAAGCACTAATATCAGGTGCGAACGGTCCAATTCCATCTAACCAGAAATACCAGCTAGATATCATCATTAATAG
TGGTCAGAGACTAGCAACACTGGTTGATGACCTGCTTGATTACCACAAAATGCGCTACGGCAGCTTGGATATTAAGAAAT
CTGCGGTTGATCTGTCTGCAGCCACCAGCTTGGTGCTTGAGCTGTCACATCACCTGCTGGGTAGTAAACCAATCCGCATT
ATTAACCAAGTTCCTAGTGATTTGGGGCTAGTTTCATCTGACCCTCAACGCCTTGAGCAAGTGATGTATAACTTGGTCGG
TAATGCCATCAAGTACACATCAGAAGGTAAGATAGTCATCTCTGCAAGCGTTATTGACGACAACATTCGCGTGCAAGTTG
TTGATACCGGACAAGGTATACCCGCTGAGTATCTAGAGCACATCTTTGAACCCTTAGTTCAAGCAGGTCAAGATGCAGGC
AACTATCGTCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAACTGATTGAGCTTATGGGCGGGTCACTTTACGTAAG
TAGTCAACCGATGCTTGGCACTACCTTCAGCTTTACGCTACCTTTAGCTACGCAAGAAGAATTGCAGAACTACAGCAAGT
CTGGCAACTACTCACACTTTCAAGCTCCAGATTTAATTGATAATACTCAACAAGAAGACAGCGTTATCAATGAAAACCCT
GACGGCCCACTCTTAGTAATCGCAGATGATGAGCCAGTAAACCTAAGAGTATTAGACAGTTTCTTGAAGTTAGAAGGTTT
TCGAGTTCGTACCGCATGTGACGGCCCAGAAACCATTGAAATAATTGAAAAAGAGAAGCCTGAATTACTTCTACTCGACA
TCATGATGCCTGGTATGAGTGGCTACCAGGTTTGTGAGACACTGCGTAAACAATATGACCATGCACAGTTACCAATTATC
ATGCTTACGGCGCTTAACCAGGCAGAGGACCGAGTGCGAGGCTTCGAAGTCGGAGCCAACGATTACTTATCCAAGCCATT
CAACAAACAAGAGTTAGCCGCTCGAATTACTGCGCACCTATCAGCAAGCAAAGCTGAGCAAAGACGACTTGAAAATGACC
AACTGCAACTAGAGCTTAAACACAGAGCCATGGTTGAAGCTAATTTACTAGAGACACAAGGACGTTTACTAGAACAGTTA
GAATCAGCCCCTGAAGCCATTATATGTATTCGTGATGATCAACGTATTCGCTTCGCCAACGAAGCAGCAGCGAAACTCTT
TAGGCGTGGGCAAGAGCAACTTAAGCGTTCAATGGCTGACGAAATCATTGCTCCTAAGTACCTCAAAATAGAACAAGCCC
ACTACTGCGGTGATATTGATATCTACATAGATGACACACGTCAGCGTATTCCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTACATCTTCAATGTGGGTGGTGGCGTTAACTCAAACCGAGTCAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTCCAACAGCTGAAAGAGCTCGGAGGTGAGTTTACTC
GTATCGCAGATAAAGCGAGCGGTGAAGGTAAAAATAAACAGGAATTAATGCGTGAAGTATTGGTTGATGCGATGACCAAT
GCCATCATTTACTGGGAATCAGTAACAGGTGAAACTAAGTTTGCCTTCGCAGAGAAAAGTGGCTTGTGGCGTGTCTACTT
AGACCGAAGTACACTTCAGACTCGAACACTAGACAAATACCTACGCGTAGAAACCCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTGAGCTCAATCGAATTCATACTGGAACACTGCAAAGAACAGACGCCAGAAAGAACCCACATTGAGATGCTAAGG
GATAAACTTCAGAAACTACTGACCAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• PAS domain (PAS_8) (880-914)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.642	100	0.756