Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OIO43_RS05460 Genome accession   NZ_CP107599
Coordinates   1145670..1146611 (+) Length   313 a.a.
NCBI ID   WP_001210794.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 1326584     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1140670..1151611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIO43_RS05450 (OIO43_05450) basA 1141091..1142938 (+) 1848 WP_000910259.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  OIO43_RS05455 (OIO43_05455) basB 1143009..1145039 (-) 2031 WP_000939849.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OIO43_RS05460 (OIO43_05460) ceuB 1145670..1146611 (+) 942 WP_001210794.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OIO43_RS05465 (OIO43_05465) bauC 1146611..1147558 (+) 948 WP_001223280.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OIO43_RS05470 (OIO43_05470) bauE 1147555..1148325 (+) 771 WP_000582113.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OIO43_RS05475 (OIO43_05475) bauB 1148332..1149300 (+) 969 WP_001104131.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34063.15 Da        Isoelectric Point: 8.4589

>NTDB_id=644319 OIO43_RS05460 WP_001210794.1 1145670..1146611(+) (ceuB) [Acinetobacter baumannii strain 1326584]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRWIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAYRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=644319 OIO43_RS05460 WP_001210794.1 1145670..1146611(+) (ceuB) [Acinetobacter baumannii strain 1326584]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCGAGCTTAATTTATATCGCAATTATTCGCTGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGCGCTTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCATACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCCTAGGACTTA
GTTATGCAGCTATAGCCGCTATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGGGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

43.919

94.569

0.415