Detailed information NTG0643993

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LZI70_RS08155
• Genome accession: NZ_CP090614
• Coordinates: 1848943..1849947 (-)
• Length: 334 a.a.
• NCBI ID: WP_255229732.1
• Uniprot ID: -
• Organism: Vibrio pelagius strain WXL662
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1843943..1854947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZI70_RS08125 (LZI70_08115)	zapB	1844196..1844438 (+)	243	WP_255229728.1	cell division protein ZapB	-
LZI70_RS08130 (LZI70_08120)	rraA	1844509..1845027 (-)	519	WP_255229729.1	ribonuclease E activity regulator RraA	-
LZI70_RS08135 (LZI70_08125)	-	1845101..1846018 (-)	918	WP_255229730.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LZI70_RS08140 (LZI70_08130)	hslU	1846178..1847512 (-)	1335	WP_255229731.1	HslU--HslV peptidase ATPase subunit	-
LZI70_RS08145 (LZI70_08135)	hslV	1847564..1848112 (-)	549	WP_032549976.1	ATP-dependent protease subunit HslV	-
LZI70_RS08150 (LZI70_08140)	-	1848288..1848821 (-)	534	WP_255231787.1	SPOR domain-containing protein	-
LZI70_RS08155 (LZI70_08145)	cytR	1848943..1849947 (-)	1005	WP_255229732.1	DNA-binding transcriptional regulator CytR	Regulator
LZI70_RS08160 (LZI70_08150)	priA	1850182..1852383 (-)	2202	WP_255229733.1	primosomal protein N'	-
LZI70_RS08165 (LZI70_08155)	rpmE	1852706..1852924 (+)	219	WP_255229734.1	50S ribosomal protein L31	-
LZI70_RS08170 (LZI70_08160)	-	1853132..1854418 (+)	1287	WP_255229735.1	malic enzyme-like NAD(P)-binding protein	-
LZI70_RS08175 (LZI70_08165)	metJ	1854585..1854905 (-)	321	WP_004415993.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36590.11 Da
• Isoelectric Point: 6.3471

>NTDB_id=643993 LZI70_RS08155 WP_255229732.1 1848943..1849947(-) (cytR) [Vibrio pelagius strain WXL662]
MATMKDVAQLAGVSTATVSRALMNPEKVSVTTRKRVETAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKAEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPTSATLCQFRQQGYQQALRRAGVTMNPAYSTVGDFTFEAGAQAVRQLLAMPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPHDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDMLKGNDVQAGSRLLE
AKLVVRGSTAPPRM

Nucleotide

• Length: 1005 bp

>NTDB_id=643993 LZI70_RS08155 WP_255229732.1 1848943..1849947(-) (cytR) [Vibrio pelagius strain WXL662]
ATGGCGACAATGAAGGATGTTGCCCAGTTGGCAGGTGTATCAACAGCGACAGTATCGCGAGCGCTGATGAACCCTGAAAA
AGTATCGGTGACGACTCGAAAGCGAGTTGAAACAGCGGTACTCGAAGCTGGATACTCACCCAACACTTTAGCTAGAAACT
TACGTCGCAACGAATCTAAAACCATCATCACCATCGTTCCTGATATCTGTGATCCCTACTTCGCTGAAATCATTCGCGGT
ATTGAAGACGCTGCCGTTGAAAACGACTACTTGGTGCTTCTAGGTGATAGCGGACAACAGAAAAAGCGTGAGAGCTCGTT
CGTAAACTTGGTCTTCACCAAGCAAGCAGACGGTATGCTGCTACTGGGAACCGACCACCCATTTGACGTCAGCAAAGCCG
AGCAGAAAAACCTGCCACCAATGGTTATGGCGTGTGAATTCGCTCCAGAGCTTGAGCTACCAACGGTACATATCGATAAC
CTGACCTCGGCATTTGAAGCGGTGAACTACCTAGCTCAGTTGGGTCATAAGCGTATCGCTCAGATCTCAGGCCCGACATC
AGCAACTCTCTGCCAATTCCGTCAACAAGGCTATCAACAAGCACTGCGCCGCGCAGGGGTTACCATGAACCCAGCCTACA
GCACGGTCGGTGACTTTACCTTTGAAGCGGGTGCACAAGCCGTTCGCCAACTGCTTGCAATGCCAGAGCAACCAACCGCT
ATTTTCTGTCACAATGACGCGATGGCAATCGGGGCGATTCAAGAAGCGAAGAAACTAGGTCTGCGCGTTCCGCACGATCT
ATCGATTGTCGGCTTCGATGATATTCAATTCGCCCAATACTGCGATCCACCGTTGACGACGATTTCTCAGCCTCGCTACG
AGATTGGGCGTCAGGCCATGCTAATGATGCTTGATATGCTCAAAGGCAATGATGTTCAAGCCGGTTCTCGTCTGCTTGAA
GCGAAACTGGTCGTTCGTGGGAGTACGGCACCACCGCGCATGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	88.855	99.401	0.883
cytR	Vibrio parahaemolyticus RIMD 2210633	86.186	99.701	0.859