Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OIO53_RS13420 Genome accession   NZ_CP107579
Coordinates   2786336..2787277 (-) Length   313 a.a.
NCBI ID   WP_031961018.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 1326525-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2781336..2792277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIO53_RS13405 (OIO53_13410) bauB 2783647..2784615 (-) 969 WP_001104128.1 siderophore-binding periplasmic lipoprotein BauB -
  OIO53_RS13410 (OIO53_13415) bauE 2784622..2785392 (-) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OIO53_RS13415 (OIO53_13420) bauC 2785389..2786336 (-) 948 WP_031961017.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OIO53_RS13420 (OIO53_13425) ceuB 2786336..2787277 (-) 942 WP_031961018.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OIO53_RS13425 (OIO53_13430) - 2787277..2787408 (-) 132 WP_001218004.1 hypothetical protein -
  OIO53_RS13430 (OIO53_13435) basB 2787908..2789935 (+) 2028 WP_109067377.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OIO53_RS13435 (OIO53_13440) basA 2790006..2791853 (-) 1848 WP_031961022.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34057.10 Da        Isoelectric Point: 8.4665

>NTDB_id=643695 OIO53_RS13420 WP_031961018.1 2786336..2787277(-) (ceuB) [Acinetobacter baumannii strain 1326525-1]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGFILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYATIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=643695 OIO53_RS13420 WP_031961018.1 2786336..2787277(-) (ceuB) [Acinetobacter baumannii strain 1326525-1]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCTTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGTTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCGACTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTAGC
GTTGGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCAATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTAGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419