Detailed information NTG0643171

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LOD78_RS02795
• Genome accession: NZ_CP090522
• Coordinates: 534354..535403 (+)
• Length: 349 a.a.
• NCBI ID: WP_171988893.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SS17
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 529354..540403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOD78_RS02760 (LOD78_02745)	-	530085..531179 (+)	1095	WP_274505678.1	histidine kinase	-
LOD78_RS02765 (LOD78_02750)	-	531176..531775 (+)	600	WP_274505679.1	response regulator transcription factor	-
LOD78_RS02770 (LOD78_02755)	-	531893..532114 (+)	222	WP_024396172.1	YqgQ family protein	-
LOD78_RS02775 (LOD78_02760)	-	532111..532497 (+)	387	WP_130554731.1	rhodanese-like domain-containing protein	-
LOD78_RS02780 (LOD78_02765)	-	532533..533264 (+)	732	WP_274505680.1	hypothetical protein	-
LOD78_RS02785 (LOD78_02770)	rsmD	533350..533889 (+)	540	WP_171988895.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LOD78_RS02790 (LOD78_02775)	coaD	533879..534367 (+)	489	WP_171988894.1	pantetheine-phosphate adenylyltransferase	-
LOD78_RS02795 (LOD78_02780)	sepM	534354..535403 (+)	1050	WP_171988893.1	SepM family pheromone-processing serine protease	Regulator
LOD78_RS02800 (LOD78_02785)	-	535687..536340 (+)	654	WP_274505681.1	YutD family protein	-
LOD78_RS02805 (LOD78_02790)	rlmN	536349..537461 (+)	1113	WP_171988891.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
LOD78_RS02810 (LOD78_02795)	-	537458..537970 (+)	513	WP_171988890.1	VanZ family protein	-
LOD78_RS02815 (LOD78_02800)	nadE	538409..539233 (-)	825	WP_171988889.1	ammonia-dependent NAD(+) synthetase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37862.66 Da
• Isoelectric Point: 4.1352

>NTDB_id=643171 LOD78_RS02795 WP_171988893.1 534354..535403(+) (sepM) [Streptococcus parasuis strain SS17]
MKKNKKWLLIVSIIMGTLLIWFSVFVRLPYYIESPGGASDIREVLTVNNEEDEEPGSYNFTYVSVLQATALQLLIAQFNP
YADIVSAEEMTGGADSEEYYRIAQFYMETSQNMAKYQGLTLADRDVEMDFFGVYVLDLAEDSTFKNVLNIADTVVSINGQ
TFESSQGLIKYVSGLELDSDVTVGYVSDGEEKTADGKIIKLSNGKNGIGITLVDHTEVKSSVPIDFQTGGIGGPSAGMMF
TLAIYTQLAEPDLRDGRVIAGTGTIEQDGSVGDIGGADKKVLSAINAGASVFFVPNNPVDPEILKKNPTAKTNYEEAKEA
AEKANADIKIVPVTTVQEAIDYLKSTKSE

Nucleotide

• Length: 1050 bp

>NTDB_id=643171 LOD78_RS02795 WP_171988893.1 534354..535403(+) (sepM) [Streptococcus parasuis strain SS17]
ATGAAGAAAAATAAGAAATGGCTATTGATTGTTTCAATTATTATGGGGACGTTATTGATATGGTTTTCCGTTTTTGTACG
TCTACCATATTATATTGAGAGTCCTGGAGGGGCTTCGGATATTCGGGAAGTATTGACAGTCAACAATGAAGAAGATGAGG
AGCCAGGTTCTTATAATTTTACCTATGTATCGGTCTTGCAGGCAACAGCCTTACAGTTGCTGATTGCTCAGTTTAACCCC
TACGCAGATATTGTTTCTGCAGAAGAAATGACGGGTGGTGCAGACAGTGAAGAATACTATCGGATAGCTCAATTTTATAT
GGAAACCTCTCAAAACATGGCTAAATATCAAGGACTAACCTTGGCTGACAGGGATGTGGAGATGGATTTCTTTGGGGTAT
ATGTGTTGGATTTAGCAGAAGACTCTACTTTTAAAAATGTTTTGAATATCGCTGATACGGTTGTTAGTATAAATGGTCAA
ACGTTTGAATCTTCTCAGGGACTAATTAAATATGTTTCAGGCTTAGAACTTGATAGTGATGTAACAGTTGGCTATGTTAG
TGATGGAGAAGAAAAGACTGCCGACGGAAAAATTATCAAATTATCAAATGGTAAAAACGGGATTGGTATCACGCTAGTAG
ACCATACTGAGGTAAAAAGTTCTGTCCCAATTGATTTCCAAACAGGAGGAATTGGTGGTCCAAGTGCTGGTATGATGTTT
ACATTAGCTATTTATACACAGCTGGCAGAGCCAGACTTGCGTGATGGTCGTGTTATTGCAGGAACAGGAACGATTGAACA
AGATGGTTCCGTTGGAGACATCGGAGGAGCAGATAAAAAAGTATTATCTGCGATTAATGCTGGTGCAAGTGTTTTCTTTG
TTCCAAATAATCCAGTGGACCCAGAAATTTTGAAAAAGAATCCAACAGCTAAGACAAACTATGAAGAGGCAAAAGAAGCA
GCAGAAAAGGCCAATGCTGATATTAAAATCGTACCAGTGACGACTGTTCAAGAAGCCATTGATTATTTGAAGAGTACTAA
GAGCGAGTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (132-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	60.983	99.14	0.605