Detailed information NTG0642849

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: IHC91_RS12615
• Genome accession: NZ_CP090489
• Coordinates: 2730837..2734229 (+)
• Length: 1130 a.a.
• NCBI ID: WP_237029516.1
• Uniprot ID: -
• Organism: Photobacterium damselae subsp. damselae strain AS-15-3942-8
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2725837..2739229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHC91_RS12600 (IHC91_12600)	hemL	2726549..2727841 (+)	1293	WP_005301305.1	glutamate-1-semialdehyde 2,1-aminomutase	-
IHC91_RS12605 (IHC91_12605)	-	2728216..2729304 (+)	1089	WP_005301309.1	AI-2E family transporter	-
IHC91_RS12610 (IHC91_12610)	rsmC	2729504..2730523 (+)	1020	WP_237029515.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
IHC91_RS12615 (IHC91_12615)	chiS	2730837..2734229 (+)	3393	WP_237029516.1	response regulator	Regulator
IHC91_RS12620 (IHC91_12620)	-	2734930..2736606 (+)	1677	WP_005301313.1	ABC transporter substrate-binding protein	-
IHC91_RS12625 (IHC91_12625)	-	2736753..2737739 (+)	987	WP_065172285.1	ABC transporter permease	-
IHC91_RS12630 (IHC91_12630)	-	2737742..2738767 (+)	1026	WP_005301317.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127211.31 Da
• Isoelectric Point: 6.6791

>NTDB_id=642849 IHC91_RS12615 WP_237029516.1 2730837..2734229(+) (chiS) [Photobacterium damselae subsp. damselae strain AS-15-3942-8]
MQTKQRFKRLQHTLMLAFLVLSITPLTLSALYFLNSHSKDLAEQSTSHLASLLENKKKQLNQFFAAKESEVQSFARSELA
NASGGRFYGLVGAYHQLGNINNLLNGLTRDQYFKEILTAKGQKSTTNSASYVGHERYRLMYKRYNWAFDEYLKRSDFSDI
LLVDLKGNVVYSAKKPQYFALNLASGKGALKGLQPTFQAISTQAQQLKQDQEVVPVAFADFNLGGNNQSEQAWFAAPIIQ
QGYLHSYVFFQLDINKITTLLADKPQNGQTVQTLLVGQDHHMRLPNSGDLPQQLISPAINQALAGKTGVGSLLNYNNIAV
LSAFTPIKIFNHTWALVVELPEKEAFARIHQLEKIFFAAMLTAIVLVILAALWLSNSITAPLLRLTWASERVSAGDLEQK
IEGTERKDEIGRLATSFARMQCSIREKMSLISKQNQELEKNIHVIKQQNDDLQTADKLKDEFLATTSHELRTPLHGMIGI
AESLLAGANGPMQGAQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIDKHAVDLASAVRLVLELSGHLLGTKPVRII
NQIPADLPLVQADEQRLEQVLYNLVGNAIKYTSEGKIVLSATVLENQVRIQVVDTGQGIPAEQLEHIFEPLVQANTNHAN
YRQGAGLGLTISRQLLELMGGRLYVSSQPMVGTTFSFTLNIASDEQIRQSHDHGKIHHFQAPLCDATPIEMANLPENLNG
ELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPALILLDIMMPEMSGYEVCSQLRQQYTPLELPIMML
SALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAHLQAGKTEFEREKNRQLAQEIQQRKQVELSLLETQTRLLGLLES
TTEAILCIQNSGRIRYANDAAAKLFKRTPEQLERHSIDELLLTHLPDELQNNHHYSGSLCFKIGEQQQNLATDILNLPEE
SGLKQMFIFGNSGPSPQQRVQMLEEAIDVLSSYAFDGDKDNLQQLRELGGEFTRLADKLGNDAPNKQDILRELLVDAMRT
TLEVWEQDTKKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVISTIDYVLDKGSAQNIQHQQLSQMR
DKLQNLLRAS

Nucleotide

• Length: 3393 bp

>NTDB_id=642849 IHC91_RS12615 WP_237029516.1 2730837..2734229(+) (chiS) [Photobacterium damselae subsp. damselae strain AS-15-3942-8]
ATGCAAACAAAACAACGATTTAAACGTCTTCAGCATACATTAATGCTGGCTTTTCTTGTTCTTAGTATTACGCCATTAAC
TCTCTCCGCACTGTATTTCCTCAACTCACACTCCAAGGATTTGGCAGAGCAAAGCACATCGCATTTGGCGTCTCTTCTTG
AGAATAAGAAAAAACAACTAAACCAATTTTTTGCGGCTAAAGAGTCTGAGGTGCAAAGTTTTGCTCGATCAGAGCTTGCT
AATGCCAGTGGTGGCCGCTTCTATGGGTTAGTAGGGGCTTACCATCAATTAGGTAATATCAATAACCTGTTAAATGGCCT
GACGCGAGACCAGTATTTTAAAGAGATTCTCACGGCAAAAGGGCAAAAAAGTACCACCAACAGTGCCAGTTATGTCGGCC
ATGAGCGCTATCGTTTAATGTATAAGCGTTATAACTGGGCATTTGATGAATATCTTAAGCGCTCAGATTTTAGTGATATC
TTATTGGTTGATTTAAAAGGTAATGTGGTCTATTCCGCGAAAAAACCACAGTACTTTGCTTTAAATCTTGCTTCAGGCAA
GGGGGCCTTAAAAGGGTTACAACCAACTTTCCAAGCCATTAGCACTCAAGCTCAACAGCTAAAACAAGACCAAGAAGTCG
TACCCGTTGCTTTTGCCGATTTTAACCTAGGAGGCAATAATCAGTCAGAACAAGCCTGGTTTGCCGCCCCAATCATTCAG
CAAGGGTATTTACACAGCTACGTATTTTTCCAGCTCGATATCAATAAAATCACAACCTTACTGGCCGATAAACCGCAAAA
TGGGCAAACGGTGCAAACTCTATTAGTAGGCCAAGATCATCACATGCGCTTACCCAATAGTGGAGATTTGCCACAACAAT
TGATCAGCCCAGCCATCAACCAAGCACTTGCTGGTAAAACTGGGGTAGGCAGTTTGCTTAACTACAATAATATTGCCGTA
CTCAGTGCCTTTACTCCGATTAAAATCTTTAACCACACCTGGGCATTGGTAGTTGAATTACCCGAAAAAGAAGCATTTGC
TCGTATTCATCAACTCGAAAAAATCTTTTTTGCAGCCATGCTTACTGCCATCGTATTAGTGATTTTAGCCGCTCTTTGGT
TATCAAACTCAATAACGGCTCCCCTATTACGCTTAACTTGGGCATCAGAGCGAGTCTCTGCAGGCGATCTAGAACAAAAA
ATCGAAGGAACAGAACGTAAAGATGAAATTGGTCGTCTTGCCACTAGCTTTGCTCGAATGCAATGTTCTATTCGGGAAAA
AATGAGTTTAATTAGCAAGCAAAATCAAGAACTTGAAAAAAACATTCACGTAATCAAACAACAAAATGATGATCTACAAA
CCGCCGACAAACTAAAAGATGAGTTCTTAGCGACGACTTCACATGAGTTGCGAACCCCTCTTCACGGGATGATTGGGATA
GCCGAATCCTTACTTGCTGGAGCAAATGGACCAATGCAAGGAGCCCAACGCCGTCAATTGGAAATGTTGATCAACAGTGG
GCAGCGTCTAACAAACTTAGTTGATGATCTACTTGATTATCACAAAATGCGTTATGGCGATCTCGATATTGATAAACATG
CGGTCGATCTTGCCAGCGCTGTTCGGTTAGTTCTTGAATTATCAGGCCATTTATTGGGAACCAAACCGGTTCGAATCATT
AACCAAATACCCGCTGATTTACCTTTAGTTCAAGCCGATGAACAACGCCTAGAGCAAGTGCTGTATAACTTGGTTGGTAA
TGCAATCAAATATACCTCTGAAGGTAAGATTGTGCTTTCTGCAACAGTATTGGAAAACCAAGTTCGCATTCAAGTGGTTG
ATACAGGACAAGGAATTCCAGCAGAACAACTTGAACACATCTTTGAACCATTAGTTCAAGCCAACACCAATCATGCTAAC
TATCGTCAAGGGGCGGGCCTTGGTTTAACCATTAGCCGTCAATTACTGGAGTTAATGGGTGGTCGCCTGTACGTCAGCAG
TCAGCCAATGGTGGGAACCACTTTTAGTTTCACCCTAAACATCGCCTCCGACGAACAAATTCGCCAAAGCCATGATCACG
GTAAAATTCATCACTTCCAAGCTCCATTGTGTGATGCCACTCCGATTGAAATGGCAAATTTACCTGAAAACTTAAATGGT
GAACTACTACTCGTGGTTGATGATGAACCCGTTAATCTTCAGATACTCAATAACTTCCTAAGACTTGAAGGGTATCGAGT
TCTCACTGCAGAAAGCGGAAAACAGGCCCTTGAGTTAGTACAAAGCCACAAACCCGCACTGATTTTACTCGATATTATGA
TGCCAGAAATGAGTGGTTATGAGGTTTGTAGCCAATTGCGCCAACAATATACCCCATTAGAACTACCGATCATGATGCTA
TCTGCATTGGGGCAAGTTAAAGATCGCGTTAAAGGTTTTGAATGCGGCGCCAATGATTACCTAACAAAACCTTTTAATAA
AGAAGAGCTTACCGCACGTATAAAAGCCCATCTTCAAGCGGGGAAAACTGAATTTGAGCGAGAAAAAAATCGTCAATTAG
CTCAAGAAATTCAACAACGTAAGCAAGTTGAGTTAAGTTTACTTGAGACCCAAACTCGATTACTTGGCCTATTAGAATCC
ACCACCGAAGCCATTTTATGTATTCAAAATAGTGGGCGAATTCGTTATGCCAATGACGCTGCGGCTAAATTATTTAAACG
CACCCCAGAGCAATTGGAGCGCCACTCTATCGATGAACTACTGCTAACCCACCTACCTGATGAGTTACAAAATAATCATC
ATTACAGTGGTTCACTGTGTTTCAAAATTGGCGAACAACAACAAAACCTTGCTACCGATATCCTCAATTTGCCAGAAGAG
TCTGGACTTAAGCAGATGTTTATCTTCGGCAATAGCGGGCCATCGCCACAGCAACGAGTACAAATGCTTGAAGAAGCTAT
TGATGTTTTATCGAGCTATGCTTTTGATGGTGACAAAGACAACTTACAACAATTGCGTGAGCTAGGTGGAGAATTCACCA
GACTGGCAGACAAATTGGGTAATGATGCCCCTAATAAACAAGATATTTTGCGCGAACTGCTGGTTGATGCCATGCGTACA
ACGCTTGAGGTTTGGGAGCAAGATACGAAAAAAACCAAGTTTGATTTAGCCGAAGAGAGTGGATTATGGCGTGTTTATCT
CGATCGCAGTACGCTACAAACTCGCACCTTAGATAAATATCTCCATGTTGAGACTCTTCCTAAAACGCCGCGTTGGCGCA
CGGTTATTAGCACCATAGACTATGTTCTTGATAAAGGCAGTGCTCAAAATATCCAACATCAACAGCTGAGCCAGATGCGA
GATAAATTGCAGAACTTATTACGAGCAAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Response regulator receiver domain (Response_reg) (724-835)

• HAMP domain (HAMP) (373-421)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.938	100	0.589