Detailed information NTG0642632

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: LUR16_RS06805
• Genome accession: NZ_CP090475
• Coordinates: 1381281..1382255 (+)
• Length: 324 a.a.
• NCBI ID: WP_011275668.1
• Uniprot ID: -
• Organism: Staphylococcus haemolyticus strain BC5211
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1376281..1387255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LUR16_RS06770	rpmG	1376713..1376862 (+)	150	WP_011275661.1	50S ribosomal protein L33	-
LUR16_RS06775	-	1377099..1377635 (+)	537	WP_011275662.1	5-formyltetrahydrofolate cyclo-ligase	-
LUR16_RS06780	-	1377651..1379108 (+)	1458	WP_011275663.1	rhomboid family protein	-
LUR16_RS06785	-	1379092..1379295 (+)	204	WP_011275664.1	YqgQ family protein	-
LUR16_RS06790	-	1379292..1380278 (+)	987	WP_011275665.1	ROK family glucokinase	-
LUR16_RS06795	-	1380278..1380601 (+)	324	WP_011275666.1	MTH1187 family thiamine-binding protein	-
LUR16_RS06800	-	1380603..1381229 (+)	627	WP_076690015.1	MBL fold metallo-hydrolase	-
LUR16_RS06805	comGA	1381281..1382255 (+)	975	WP_011275668.1	competence type IV pilus ATPase ComGA	Machinery gene
LUR16_RS06810	comGB	1382227..1383291 (+)	1065	WP_076690016.1	competence type IV pilus assembly protein ComGB	-
LUR16_RS06815	comGC	1383305..1383625 (+)	321	WP_011275670.1	competence type IV pilus major pilin ComGC	Machinery gene
LUR16_RS06820	comGD	1383606..1384058 (+)	453	WP_370444504.1	competence type IV pilus minor pilin ComGD	-
LUR16_RS12580	-	1384256..1384747 (+)	492	WP_011275673.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
LUR16_RS06825	-	1384907..1385425 (+)	519	WP_011275674.1	shikimate kinase	-
LUR16_RS06830	gcvT	1385614..1386705 (+)	1092	WP_011275675.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37137.14 Da
• Isoelectric Point: 8.6557

>NTDB_id=642632 LUR16_RS06805 WP_011275668.1 1381281..1382255(+) (comGA) [Staphylococcus haemolyticus strain BC5211]
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF

Nucleotide

• Length: 975 bp

>NTDB_id=642632 LUR16_RS06805 WP_011275668.1 1381281..1382255(+) (comGA) [Staphylococcus haemolyticus strain BC5211]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	65.325	99.691	0.651
comGA	Staphylococcus aureus N315	65.325	99.691	0.651