Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LUR16_RS01945 Genome accession   NZ_CP090475
Coordinates   413150..413818 (+) Length   222 a.a.
NCBI ID   WP_016930642.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain BC5211     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 408150..418818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUR16_RS01915 - 408949..409050 (+) 102 WP_016930637.1 SE2200 family small protein -
  LUR16_RS01920 - 409451..409669 (+) 219 Protein_382 DegT/DnrJ/EryC1/StrS family aminotransferase -
  LUR16_RS01925 - 409689..410636 (+) 948 WP_016930639.1 LCP family protein -
  LUR16_RS01930 - 410726..412201 (-) 1476 WP_016930640.1 alkaline phosphatase -
  LUR16_RS01935 - 412600..412770 (+) 171 WP_011274728.1 hypothetical protein -
  LUR16_RS01940 - 412956..413120 (+) 165 WP_016930641.1 hypothetical protein -
  LUR16_RS01945 braR 413150..413818 (+) 669 WP_016930642.1 response regulator transcription factor Regulator
  LUR16_RS01950 braS 413821..414717 (+) 897 WP_011274731.1 sensor histidine kinase Regulator
  LUR16_RS01955 - 414899..415648 (+) 750 WP_011274732.1 ABC transporter ATP-binding protein -
  LUR16_RS01960 - 415650..417641 (+) 1992 WP_076689847.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25695.51 Da        Isoelectric Point: 4.6536

>NTDB_id=642616 LUR16_RS01945 WP_016930642.1 413150..413818(+) (braR) [Staphylococcus haemolyticus strain BC5211]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVTVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=642616 LUR16_RS01945 WP_016930642.1 413150..413818(+) (braR) [Staphylococcus haemolyticus strain BC5211]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77