Detailed information NTG0642373

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OGM32_RS14305
• Genome accession: NZ_CP107188
• Coordinates: 2960574..2961599 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain R2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2955574..2966599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGM32_RS14275 (OGM32_14250)	zapB	2955658..2955903 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
OGM32_RS14280 (OGM32_14255)	rraA	2955988..2956473 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OGM32_RS14285 (OGM32_14260)	menA	2956566..2957492 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OGM32_RS14290 (OGM32_14265)	hslU	2957559..2958890 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
OGM32_RS14295 (OGM32_14270)	hslV	2958900..2959430 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OGM32_RS14300 (OGM32_14275)	ftsN	2959523..2960482 (-)	960	WP_000068834.1	cell division protein FtsN	-
OGM32_RS14305 (OGM32_14280)	cytR	2960574..2961599 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
OGM32_RS14310 (OGM32_14285)	priA	2961755..2963953 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
OGM32_RS14315 (OGM32_14290)	rpmE	2964156..2964368 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
OGM32_RS14320 (OGM32_14295)	yiiX	2964429..2965037 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
OGM32_RS14325 (OGM32_14300)	metJ	2965097..2965414 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=642373 OGM32_RS14305 WP_000644908.1 2960574..2961599(-) (cytR) [Escherichia coli strain R2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=642373 OGM32_RS14305 WP_000644908.1 2960574..2961599(-) (cytR) [Escherichia coli strain R2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625