Detailed information NTG0642276

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: LZ603_RS25455
• Genome accession: NZ_CP090421
• Coordinates: 5022256..5023605 (-)
• Length: 449 a.a.
• NCBI ID: WP_234574287.1
• Uniprot ID: -
• Organism: Bacillus cereus strain NR1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5017256..5028605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ603_RS25435	secA	5017582..5020089 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
LZ603_RS25440	raiA	5020364..5020906 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
LZ603_RS25445	cspC	5021228..5021425 (-)	198	WP_001990088.1	cold shock protein CspC	-
LZ603_RS25450	-	5021552..5022256 (-)	705	WP_234574286.1	ComF family protein	-
LZ603_RS25455	comFA	5022256..5023605 (-)	1350	WP_234574287.1	ATP-dependent helicase ComFA	Machinery gene
LZ603_RS25460	-	5023732..5025177 (-)	1446	WP_000499477.1	C40 family peptidase	-
LZ603_RS25465	-	5025326..5025640 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
LZ603_RS25470	-	5025813..5026655 (-)	843	WP_000684725.1	DegV family protein	-
LZ603_RS25475	-	5026892..5027527 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51130.97 Da
• Isoelectric Point: 9.8987

>NTDB_id=642276 LZ603_RS25455 WP_234574287.1 5022256..5023605(-) (comFA) [Bacillus cereus strain NR1]
MLAGKQLLLEELSSDLQRELNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRWLFASFLCKRCSKVCTYCRKCIAMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAKGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=642276 LZ603_RS25455 WP_234574287.1 5022256..5023605(-) (comFA) [Bacillus cereus strain NR1]
ATGCTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGGAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAACGTAGATCGGTGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAGCGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGAAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCCCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (107-254)

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.584	98.441	0.508