Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LZ603_RS05920 Genome accession   NZ_CP090421
Coordinates   1165360..1165536 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain NR1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1160360..1170536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZ603_RS05900 clpC 1160691..1163291 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  LZ603_RS05905 - 1163330..1163512 (-) 183 WP_001211116.1 YjzD family protein -
  LZ603_RS05910 - 1163669..1164403 (+) 735 WP_000028712.1 hydrolase -
  LZ603_RS05915 - 1164433..1165305 (+) 873 WP_002204825.1 NAD(P)-dependent oxidoreductase -
  LZ603_RS05920 comZ 1165360..1165536 (+) 177 WP_001986215.1 ComZ family protein Regulator
  LZ603_RS05925 fabH 1166244..1167176 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  LZ603_RS05930 fabF 1167208..1168446 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  LZ603_RS05935 - 1168553..1169341 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  LZ603_RS05940 - 1169485..1170231 (+) 747 WP_050252206.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=642246 LZ603_RS05920 WP_001986215.1 1165360..1165536(+) (comZ) [Bacillus cereus strain NR1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=642246 LZ603_RS05920 WP_001986215.1 1165360..1165536(+) (comZ) [Bacillus cereus strain NR1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586