Detailed information NTG0642088

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: LZM82_RS16170
• Genome accession: NZ_CP090400
• Coordinates: 587247..588341 (+)
• Length: 364 a.a.
• NCBI ID: WP_000823678.1
• Uniprot ID: Q9KLK6
• Organism: Vibrio cholerae strain PanChol
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 582247..593341

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZM82_RS16145 (LZM82_16145)	-	583390..583641 (-)	252	WP_001882582.1	YgjV family protein	-
LZM82_RS16150 (LZM82_16150)	-	584054..584374 (-)	321	WP_001089529.1	DUF496 family protein	-
LZM82_RS16155 (LZM82_16155)	-	584562..584759 (+)	198	WP_001246071.1	hypothetical protein	-
LZM82_RS16160 (LZM82_16160)	-	584801..585451 (+)	651	WP_001025631.1	YceH family protein	-
LZM82_RS18805	-	585468..585773 (+)	306	Protein_498	GIY-YIG nuclease family protein	-
LZM82_RS16165 (LZM82_16165)	traF	585875..587035 (+)	1161	WP_001025860.1	conjugal transfer protein TraF	-
LZM82_RS16170 (LZM82_16170)	luxP	587247..588341 (+)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
LZM82_RS16175 (LZM82_16175)	luxQ	588359..590932 (+)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
LZM82_RS16180 (LZM82_16180)	-	590924..591589 (-)	666	WP_000268204.1	flagellar brake protein	-
LZM82_RS16185 (LZM82_16185)	-	591833..592351 (-)	519	WP_000914961.1	hypothetical protein	-
LZM82_RS16190 (LZM82_16190)	-	592603..593001 (-)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41196.81 Da
• Isoelectric Point: 6.3129

>NTDB_id=642088 LZM82_RS16170 WP_000823678.1 587247..588341(+) (luxP) [Vibrio cholerae strain PanChol]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=642088 LZM82_RS16170 WP_000823678.1 587247..588341(+) (luxP) [Vibrio cholerae strain PanChol]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

3D structure

• AlphaFold DB: Q9KLK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	100	100	1