Detailed information NTG0641902

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: LY388_RS02930
• Genome accession: NZ_CP090386
• Coordinates: 683485..684579 (+)
• Length: 364 a.a.
• NCBI ID: WP_234115869.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain GXFL1-4
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 678485..689579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LY388_RS02900 (LY388_02900)	-	679645..679896 (-)	252	WP_001882582.1	YgjV family protein	-
LY388_RS02905 (LY388_02905)	-	680309..680629 (-)	321	WP_001089529.1	DUF496 family protein	-
LY388_RS02910 (LY388_02910)	-	680817..681014 (+)	198	WP_001246071.1	hypothetical protein	-
LY388_RS02915 (LY388_02915)	-	681056..681706 (+)	651	WP_001025632.1	YceH family protein	-
LY388_RS02920 (LY388_02920)	-	681706..682011 (+)	306	WP_114725439.1	GIY-YIG nuclease family protein	-
LY388_RS02925 (LY388_02925)	traF	682113..683273 (+)	1161	WP_001025864.1	conjugal transfer protein TraF	-
LY388_RS02930 (LY388_02930)	luxP	683485..684579 (+)	1095	WP_234115869.1	substrate-binding domain-containing protein	Regulator
LY388_RS02935 (LY388_02935)	luxQ	684597..687170 (+)	2574	WP_041052081.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
LY388_RS02940 (LY388_02940)	-	687162..687827 (-)	666	WP_000268198.1	flagellar brake protein	-
LY388_RS02945 (LY388_02945)	-	688071..688589 (-)	519	WP_000914961.1	hypothetical protein	-
LY388_RS02950 (LY388_02950)	-	688827..689225 (-)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41166.79 Da
• Isoelectric Point: 6.3129

>NTDB_id=641902 LY388_RS02930 WP_234115869.1 683485..684579(+) (luxP) [Vibrio cholerae strain GXFL1-4]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPGALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=641902 LY388_RS02930 WP_234115869.1 683485..684579(+) (luxP) [Vibrio cholerae strain GXFL1-4]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGGGTGCGTTGACGGTGGCGCAAGAACAACCCGTTATTATTTCAGTGGTCTATCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGACGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCATCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCCCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGCTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	99.725	100	0.997