Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   LZG54_RS03940 Genome accession   NZ_CP090382
Coordinates   827598..832157 (+) Length   1519 a.a.
NCBI ID   WP_234114658.1    Uniprot ID   -
Organism   Acinetobacter towneri strain SCLZS30     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 822598..837157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZG54_RS03915 (LZG54_03930) - 823061..823705 (-) 645 WP_234114656.1 hypothetical protein -
  LZG54_RS03920 (LZG54_03935) pilG 823982..824365 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  LZG54_RS03925 (LZG54_03940) - 824398..824766 (+) 369 WP_004975526.1 PleD family two-component system response regulator -
  LZG54_RS03930 (LZG54_03945) - 824770..825306 (+) 537 WP_004975527.1 chemotaxis protein CheW -
  LZG54_RS03935 (LZG54_03950) - 825353..827428 (+) 2076 WP_234114657.1 methyl-accepting chemotaxis protein -
  LZG54_RS03940 (LZG54_03955) chpA 827598..832157 (+) 4560 WP_234114658.1 Hpt domain-containing protein Regulator
  LZG54_RS03945 (LZG54_03960) - 832161..832619 (+) 459 WP_167846162.1 hypothetical protein -
  LZG54_RS03950 (LZG54_03965) dapE 832702..833835 (-) 1134 WP_179988577.1 succinyl-diaminopimelate desuccinylase -
  LZG54_RS03955 (LZG54_03970) - 833976..834122 (-) 147 WP_234114659.1 entericidin A/B family lipoprotein -
  LZG54_RS03960 (LZG54_03975) - 834243..835127 (-) 885 WP_234114660.1 DUF1853 family protein -
  LZG54_RS03965 (LZG54_03980) - 835215..835595 (+) 381 WP_234114661.1 YbaN family protein -
  LZG54_RS03970 (LZG54_03985) elsL 835605..836129 (+) 525 WP_234114662.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1519 a.a.        Molecular weight: 168511.07 Da        Isoelectric Point: 4.2190

>NTDB_id=641878 LZG54_RS03940 WP_234114658.1 827598..832157(+) (chpA) [Acinetobacter towneri strain SCLZS30]
MKEILKNLVETMTLPEDSYLEQDAEILEIFVEEIEEIFEELNPLFTTWFANPTDQETLVTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVLSGAVTLNTDIQKYAKTVLNIYQYKLYPIFKQVGLIDLDLRPLVLLGQQLQQNQSPEPALEELLVL
ADQLTATDILTGLELADAAVETAVESSEDVMTAEEMPHTEVAQEAAADASLLAETLAIFVEEAEEHLATIDQFLAQDQIH
SQDYNGLIRALHTLRGSSSMAQIDQVFQASSKVENLFKTFVQDEIESTSKETALLVQYAEFVRDYLHVLRQGYCDGLDVI
YATFNKAWDSYGFSTSDTEDSNPQGLVSRLIELNIDRLLDAEFEFDKLAQAQFPSYLEELSAQAQLLVEHTDNRASVGIH
QFTEELKAAYDSVLAKPILLNSEYGYELFAQAHQEFIHLFDTLAAGQRVTVTEDIQKTLNDLTAFVQQDIDAIALEDAET
SVSDNAVETTVVAEPDMASAAVASENSGTVNLSQLSQRIASDQQNLHADDANKDFDPDLLDIFLEEAEELLVGMDEDVNT
WSKDASDTSALNNLMRYLHTLKGGANMISATHIGLIAHNLESIYERIINNQIVVSPALIQIIRLVQDDIADRIQTIRDER
VDYAATESIAILGNIVSLAQGDADASVAGAATKAQPEQAIEAEEVDAQPEFAAEALQDTTANLAENDIVIADDASLEDAV
TAAFEPITQTASLEASAESEDEQLHSIVVETFREEAEEILDAADQRLKQWFEQRSDRSILLQLQRAAHSLKGGARMAEIE
PVAQIAYQLESAFEQFAVHQFNSNVYDALLQTTLAWLRDAIFKADYTDYDSLKSSLSAMQFVDVSAQLPERLTHTDLLSP
SRSYEFVQGDGTEPPAMSGEWGETTQLDNSNEMIRISADLVEKMIDLSGENSINRSRIEMELGQLGGTLNEMELAIKRLA
DQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAE
IQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPTELVVYNTEGELDRTILERLVTPFEHMLRNAVDHGIEDPAQRAAAN
KPEVGKIELNITRQGTDVVVTFVDDGKGIDDAKIKEKALSLGLIKADQNLDKNEILQYIFHPGFTTAQSVTQISGRGVGL
DVVQSEIKALGGHVSVDSTLGQGTTFSIRVPTTVAVSDALMVKVGDQQFAVPLAQIDRIVRIAPTTLESYFNSNEDFFQI
DNQNYKLRYLSEFVANQPLPRLSHVGHSLPVLLIKGSTGQTIALLVDQLIGSRGQIVVKPIGQQFSSIGAIAGATILGDG
QVCLILDGQNIARQILATQRTKQASDQRDSQRRDTRRLIMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAMEQLENVK
PDLMLLDIEMPRMDGFEVTNLVRHHDMHSNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEQLLAVSQG

Nucleotide


Download         Length: 4560 bp        

>NTDB_id=641878 LZG54_RS03940 WP_234114658.1 827598..832157(+) (chpA) [Acinetobacter towneri strain SCLZS30]
ATGAAAGAAATATTAAAAAATTTAGTCGAAACAATGACGCTTCCTGAAGATAGTTATCTTGAGCAAGATGCGGAAATTCT
TGAAATTTTTGTCGAAGAAATTGAAGAAATCTTCGAAGAATTAAATCCATTATTTACAACTTGGTTTGCGAACCCAACAG
ATCAAGAAACTTTAGTAACTATTCGTCGTCACTTTCACACTTTAAAAGGCTCGGGTCGCATGGTGGGTGCGAAGTCTGCG
GGCGAGTTGGCATGGACGGTTGAAGATACTTTAAACCGTGTGCTTTCGGGTGCGGTAACACTCAATACTGATATTCAAAA
ATACGCAAAAACTGTTTTAAATATTTATCAATACAAGCTTTATCCAATTTTTAAGCAAGTCGGTTTAATTGATCTTGATT
TACGCCCATTGGTGCTTTTAGGACAACAATTACAGCAAAACCAAAGTCCTGAACCTGCACTGGAAGAGTTGCTAGTTCTA
GCGGATCAACTGACTGCAACTGATATACTGACAGGGCTAGAATTGGCGGATGCTGCAGTTGAAACAGCAGTTGAATCATC
TGAAGATGTAATGACTGCTGAAGAAATGCCTCATACAGAAGTTGCACAAGAAGCGGCTGCTGATGCGAGTCTATTGGCTG
AAACTCTGGCTATTTTTGTAGAAGAAGCTGAAGAGCATTTAGCGACCATTGATCAGTTCTTGGCGCAAGATCAGATTCAC
TCACAAGACTATAATGGCTTAATCCGTGCTTTACATACACTGCGCGGCAGTTCGTCTATGGCGCAAATTGATCAAGTTTT
TCAAGCCAGTTCTAAAGTTGAAAACTTGTTTAAAACATTTGTGCAAGATGAAATTGAATCCACCTCTAAAGAAACTGCGC
TGTTGGTGCAATACGCAGAATTTGTCCGTGATTATCTGCATGTACTTCGCCAAGGTTACTGTGATGGTTTAGATGTTATC
TATGCAACTTTTAATAAAGCATGGGATAGCTACGGCTTTAGCACCAGCGATACAGAAGACTCTAATCCTCAAGGTTTGGT
ATCGAGACTCATCGAACTGAATATTGATCGTTTACTTGATGCTGAATTTGAATTTGATAAATTGGCGCAAGCGCAATTCC
CAAGCTATTTAGAAGAACTCAGCGCACAAGCGCAATTATTGGTAGAGCATACTGATAACCGTGCATCAGTGGGTATCCAT
CAATTTACTGAAGAACTTAAAGCAGCTTACGACAGTGTTTTAGCCAAGCCAATTTTGCTTAACTCTGAATATGGTTATGA
GTTATTTGCACAGGCGCACCAAGAGTTTATTCATTTATTTGATACCTTGGCTGCGGGACAGCGTGTTACGGTTACTGAAG
ATATTCAGAAAACCTTAAATGACCTAACTGCATTTGTGCAGCAAGACATTGATGCAATTGCACTTGAAGATGCTGAAACA
TCAGTGAGCGACAATGCTGTAGAAACAACAGTTGTTGCAGAACCTGATATGGCGTCTGCTGCAGTTGCTAGCGAAAATTC
GGGCACAGTGAATTTATCGCAATTGTCACAACGTATTGCATCAGATCAACAAAACCTGCATGCCGATGATGCCAACAAAG
ACTTCGATCCTGACTTGCTGGATATCTTCTTGGAAGAAGCAGAAGAGCTTTTGGTGGGTATGGATGAAGACGTCAACACG
TGGTCAAAAGACGCCAGTGACACTTCGGCATTAAATAACTTAATGCGTTATTTGCACACTTTGAAAGGTGGCGCAAATAT
GATTTCTGCGACGCATATTGGTTTAATTGCACACAACCTCGAGTCGATTTACGAGCGTATCATTAACAACCAAATTGTTG
TTTCACCTGCGTTAATTCAAATTATTCGTTTGGTGCAAGATGATATTGCAGACCGTATTCAGACCATTCGTGATGAGCGT
GTGGACTATGCAGCGACAGAGTCAATTGCGATTTTAGGCAACATTGTTAGCTTGGCACAAGGCGATGCAGATGCGTCAGT
CGCAGGTGCAGCAACTAAAGCGCAGCCTGAACAGGCGATCGAAGCAGAAGAAGTTGATGCACAGCCTGAGTTCGCGGCAG
AAGCGTTGCAAGACACGACTGCAAATTTAGCTGAAAATGATATTGTTATTGCTGATGATGCAAGTCTTGAAGATGCTGTT
ACTGCGGCATTTGAACCGATAACACAAACTGCAAGTCTTGAAGCAAGTGCTGAATCTGAAGATGAGCAATTACATTCAAT
TGTGGTTGAGACTTTCAGAGAAGAAGCGGAAGAAATTTTGGATGCTGCAGATCAGCGCTTGAAACAATGGTTTGAGCAGC
GTAGTGACCGTAGTATCTTGCTTCAATTACAACGTGCGGCACACAGCTTAAAAGGCGGTGCACGTATGGCTGAAATTGAG
CCTGTTGCGCAAATTGCCTATCAACTTGAAAGTGCCTTTGAACAGTTTGCGGTGCATCAATTTAACTCAAATGTTTATGA
TGCCTTGTTGCAAACCACGTTAGCGTGGTTACGTGATGCAATTTTCAAAGCAGATTACACTGATTATGACAGCTTAAAAT
CTAGCTTGTCGGCAATGCAGTTTGTGGATGTATCTGCACAATTGCCTGAGCGTTTAACGCATACCGATTTGTTATCGCCA
AGCCGTAGTTATGAGTTTGTTCAGGGTGATGGTACAGAGCCGCCTGCAATGTCGGGTGAGTGGGGCGAAACCACACAGCT
GGATAATAGCAATGAGATGATTCGTATCTCGGCCGATTTAGTCGAGAAGATGATTGACTTGTCAGGCGAGAACTCGATTA
ACCGTTCACGTATTGAAATGGAGCTTGGGCAACTGGGCGGTACGTTGAATGAGATGGAATTGGCGATTAAACGTCTTGCC
GATCAGTTACGTCGAATGGAAGGCGAGCTGGAATCGCAAATTATTGCCAAGCACGGTTCTGAAAACTCACGTTATGCAGA
CTTTGACCCATTAGAGATGGACCAATATTCATCGTTGAATCAGTTGTCTAAATCTCTGGCGGAATCTGCATCGGACTTGG
TGGACTTTAAGAGCACCTTGGCTGAAAAAATTCGTGATGCCGAAGGTTTGTTATTACAACAATCACGTATTCAGGCTGAA
ATTCAAGAAAGCTTGATGCGTACACGCCTTGTACCATTCTCACGTTTATTGCCACGTTTACAACGTATTGTGCGTCAGAC
TTCATCGACCTTAAACCGTCCGACAGAACTGGTGGTTTATAACACTGAAGGTGAATTAGACCGTACCATTCTAGAGCGTT
TGGTGACACCGTTTGAACACATGCTGCGCAACGCGGTCGACCATGGGATTGAAGACCCTGCACAACGTGCTGCAGCCAAT
AAACCTGAAGTTGGTAAAATTGAACTGAACATTACCCGTCAAGGCACAGATGTTGTGGTGACTTTTGTGGATGATGGTAA
GGGTATTGATGATGCCAAGATTAAAGAAAAAGCATTGAGCTTAGGTTTAATCAAAGCCGATCAGAATTTAGATAAAAACG
AAATTCTGCAATACATTTTCCACCCAGGCTTTACAACAGCACAATCGGTTACACAAATTTCAGGTCGTGGCGTTGGTTTA
GACGTGGTGCAAAGTGAGATTAAGGCGCTCGGCGGTCACGTTTCTGTAGATTCAACATTAGGTCAAGGCACAACCTTTAG
TATTCGTGTACCAACGACGGTTGCGGTATCCGATGCCTTAATGGTTAAAGTTGGTGATCAACAATTTGCTGTACCGTTGG
CGCAAATTGACCGTATTGTACGTATTGCACCAACCACTTTGGAATCTTACTTCAACAGCAATGAAGATTTCTTCCAAATT
GACAACCAGAACTACAAGTTACGTTACTTATCTGAGTTCGTTGCTAATCAGCCATTACCGCGTTTAAGCCATGTGGGTCA
TTCACTACCTGTTCTGTTAATTAAAGGCAGCACAGGTCAAACCATTGCTTTACTAGTCGATCAGTTGATTGGTTCGCGTG
GTCAAATTGTTGTGAAACCAATTGGACAACAGTTCTCAAGCATTGGTGCAATTGCAGGCGCAACCATTTTGGGTGATGGT
CAAGTTTGTTTGATTTTGGATGGTCAGAACATTGCCCGTCAAATTCTTGCAACGCAACGTACTAAACAAGCCAGCGATCA
ACGTGATAGCCAACGTCGTGATACACGCCGCTTAATTATGATTGTGGATGACTCAGTCACCGTACGTAAAGTAACTTCAC
GTCTGCTTGAGCGTCAAGGTTATGACATCGTGACTGCCAAAGATGGTGTCGATGCCATGGAGCAGCTTGAAAACGTCAAA
CCTGACTTGATGTTACTGGATATTGAAATGCCACGTATGGATGGTTTTGAGGTGACTAACCTTGTACGCCACCACGACAT
GCATAGCAATCTGCCGATCATCATGATTACGTCACGTACAGGTGAAAAACACCGCGAACGAGCGTTTAGCTTGGGTGTGA
CGCACTACATGGGTAAACCGTTCCAAGAGGCAGAATTGCTTGCCAATATTGAACAATTATTAGCAGTTAGTCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.898

100

0.616