Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   LXN49_RS06880 Genome accession   NZ_CP090354
Coordinates   1393406..1393978 (+) Length   190 a.a.
NCBI ID   WP_025092353.1    Uniprot ID   A0A5C0WCR7
Organism   Bacillus safensis strain H31R-08     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1388406..1398978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXN49_RS06850 (LXN49_06850) dapD 1388521..1389231 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  LXN49_RS06855 (LXN49_06855) - 1389314..1390444 (+) 1131 WP_025092351.1 N-acetyldiaminopimelate deacetylase -
  LXN49_RS06860 (LXN49_06860) - 1390495..1390737 (+) 243 WP_024424725.1 YkuS family protein -
  LXN49_RS06865 (LXN49_06865) - 1390760..1391569 (-) 810 WP_234107738.1 mechanosensitive ion channel family protein -
  LXN49_RS06870 (LXN49_06870) ahpA 1391841..1392383 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  LXN49_RS06875 (LXN49_06875) - 1392466..1392924 (+) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  LXN49_RS06880 (LXN49_06880) rok 1393406..1393978 (+) 573 WP_025092353.1 transcriptional regulator Rok Regulator
  LXN49_RS06885 (LXN49_06885) - 1394026..1394943 (-) 918 WP_034623329.1 hypothetical protein -
  LXN49_RS06890 (LXN49_06890) - 1395029..1395610 (+) 582 WP_234107740.1 molybdenum cofactor guanylyltransferase -
  LXN49_RS06895 (LXN49_06895) - 1395641..1396657 (+) 1017 WP_234107742.1 ThiF family adenylyltransferase -
  LXN49_RS06900 (LXN49_06900) glp 1396667..1397944 (+) 1278 WP_234107744.1 gephyrin-like molybdotransferase Glp -
  LXN49_RS06905 (LXN49_06905) mobB 1397926..1398450 (+) 525 WP_024424784.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  LXN49_RS06910 (LXN49_06910) - 1398447..1398938 (+) 492 WP_024424732.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21547.49 Da        Isoelectric Point: 9.7309

>NTDB_id=641592 LXN49_RS06880 WP_025092353.1 1393406..1393978(+) (rok) [Bacillus safensis strain H31R-08]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=641592 LXN49_RS06880 WP_025092353.1 1393406..1393978(+) (rok) [Bacillus safensis strain H31R-08]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTATCAGCAG
CCGGCACAAACACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C0WCR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8