Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LXN49_RS04175 Genome accession   NZ_CP090354
Coordinates   884200..884991 (+) Length   263 a.a.
NCBI ID   WP_234107675.1    Uniprot ID   -
Organism   Bacillus safensis strain H31R-08     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 879200..889991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXN49_RS04140 (LXN49_04140) - 879286..879834 (+) 549 WP_039177253.1 thioredoxin family protein -
  LXN49_RS04145 (LXN49_04145) - 880168..880635 (+) 468 WP_048240073.1 thiol-disulfide oxidoreductase DCC family protein -
  LXN49_RS04150 (LXN49_04150) - 880672..881928 (-) 1257 WP_234107672.1 helix-turn-helix domain-containing protein -
  LXN49_RS04155 (LXN49_04155) - 882203..882790 (+) 588 WP_234107673.1 nitroreductase -
  LXN49_RS04160 (LXN49_04160) - 882829..882984 (-) 156 WP_041087330.1 YfhD family protein -
  LXN49_RS04165 (LXN49_04165) - 883046..883156 (-) 111 WP_017358836.1 YfhE family protein -
  LXN49_RS04170 (LXN49_04170) - 883209..884105 (-) 897 WP_234107674.1 TIGR01777 family oxidoreductase -
  LXN49_RS04175 (LXN49_04175) recX 884200..884991 (+) 792 WP_234107675.1 recombination regulator RecX Regulator
  LXN49_RS04180 (LXN49_04180) - 884995..885309 (+) 315 WP_041087336.1 YfhH family protein -
  LXN49_RS04185 (LXN49_04185) - 885537..885710 (-) 174 WP_008360604.1 YpzG family protein -
  LXN49_RS04190 (LXN49_04190) - 885736..885885 (-) 150 WP_234107676.1 small, acid-soluble spore protein K -
  LXN49_RS04195 (LXN49_04195) - 886002..886274 (+) 273 WP_024425219.1 YfhJ family protein -
  LXN49_RS04200 (LXN49_04200) - 886574..887557 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30621.06 Da        Isoelectric Point: 6.6679

>NTDB_id=641576 LXN49_RS04175 WP_234107675.1 884200..884991(+) (recX) [Bacillus safensis strain H31R-08]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLDE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=641576 LXN49_RS04175 WP_234107675.1 884200..884991(+) (recX) [Bacillus safensis strain H31R-08]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTGGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAACTGGACGAAGCAGATATCATTGAAATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGTAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAAGGCATAGACGATGACACGATTGAACAGGCGCTATCGCAATACCCTGACGACTTACAGCTGGATGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAAGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639