Detailed information NTG0641350

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OGM44_RS14500
• Genome accession: NZ_CP107143
• Coordinates: 2983379..2984404 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain S2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2978379..2989404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGM44_RS14470 (OGM44_14450)	zapB	2978463..2978708 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
OGM44_RS14475 (OGM44_14455)	rraA	2978793..2979278 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OGM44_RS14480 (OGM44_14460)	menA	2979371..2980297 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OGM44_RS14485 (OGM44_14465)	hslU	2980364..2981695 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
OGM44_RS14490 (OGM44_14470)	hslV	2981705..2982235 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OGM44_RS14495 (OGM44_14475)	ftsN	2982328..2983287 (-)	960	WP_000068834.1	cell division protein FtsN	-
OGM44_RS14500 (OGM44_14480)	cytR	2983379..2984404 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
OGM44_RS14505 (OGM44_14485)	priA	2984560..2986758 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
OGM44_RS14510 (OGM44_14490)	rpmE	2986961..2987173 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
OGM44_RS14515 (OGM44_14495)	yiiX	2987234..2987842 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
OGM44_RS14520 (OGM44_14500)	metJ	2987902..2988219 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=641350 OGM44_RS14500 WP_000644908.1 2983379..2984404(-) (cytR) [Escherichia coli strain S2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=641350 OGM44_RS14500 WP_000644908.1 2983379..2984404(-) (cytR) [Escherichia coli strain S2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625