Detailed information NTG0641264

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OGM45_RS14295
• Genome accession: NZ_CP107142
• Coordinates: 2928367..2929392 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain S3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2923367..2934392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGM45_RS14265 (OGM45_14240)	zapB	2923451..2923696 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
OGM45_RS14270 (OGM45_14245)	rraA	2923781..2924266 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OGM45_RS14275 (OGM45_14250)	menA	2924359..2925285 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OGM45_RS14280 (OGM45_14255)	hslU	2925352..2926683 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
OGM45_RS14285 (OGM45_14260)	hslV	2926693..2927223 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OGM45_RS14290 (OGM45_14265)	ftsN	2927316..2928275 (-)	960	WP_000068834.1	cell division protein FtsN	-
OGM45_RS14295 (OGM45_14270)	cytR	2928367..2929392 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
OGM45_RS14300 (OGM45_14275)	priA	2929548..2931746 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
OGM45_RS14305 (OGM45_14280)	rpmE	2931949..2932161 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
OGM45_RS14310 (OGM45_14285)	yiiX	2932222..2932830 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
OGM45_RS14315 (OGM45_14290)	metJ	2932890..2933207 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=641264 OGM45_RS14295 WP_000644908.1 2928367..2929392(-) (cytR) [Escherichia coli strain S3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=641264 OGM45_RS14295 WP_000644908.1 2928367..2929392(-) (cytR) [Escherichia coli strain S3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625