Detailed information NTG0641094

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OGM47_RS15145
• Genome accession: NZ_CP107137
• Coordinates: 3064886..3065911 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain S5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3059886..3070911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGM47_RS15115 (OGM47_15095)	zapB	3059970..3060215 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
OGM47_RS15120 (OGM47_15100)	rraA	3060300..3060785 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OGM47_RS15125 (OGM47_15105)	menA	3060878..3061804 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OGM47_RS15130 (OGM47_15110)	hslU	3061871..3063202 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
OGM47_RS15135 (OGM47_15115)	hslV	3063212..3063742 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OGM47_RS15140 (OGM47_15120)	ftsN	3063835..3064794 (-)	960	WP_000068834.1	cell division protein FtsN	-
OGM47_RS15145 (OGM47_15125)	cytR	3064886..3065911 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
OGM47_RS15150 (OGM47_15130)	priA	3066067..3068265 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
OGM47_RS15155 (OGM47_15135)	rpmE	3068468..3068680 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
OGM47_RS15160 (OGM47_15140)	yiiX	3068741..3069349 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
OGM47_RS15165 (OGM47_15145)	metJ	3069409..3069726 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=641094 OGM47_RS15145 WP_000644908.1 3064886..3065911(-) (cytR) [Escherichia coli strain S5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=641094 OGM47_RS15145 WP_000644908.1 3064886..3065911(-) (cytR) [Escherichia coli strain S5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625