Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LXH20_RS05820 Genome accession   NZ_CP090150
Coordinates   1135643..1136299 (+) Length   218 a.a.
NCBI ID   WP_038461347.1    Uniprot ID   -
Organism   Bacillus velezensis strain BR-01     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1130643..1141299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXH20_RS05795 (LXH20_05795) oppF 1131173..1132090 (+) 918 WP_014417419.1 oligopeptide ABC transporter ATP-binding protein OppF -
  LXH20_RS05800 (LXH20_05800) - 1132197..1133384 (+) 1188 WP_022553557.1 putative glycoside hydrolase -
  LXH20_RS05805 (LXH20_05805) - 1133502..1134080 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  LXH20_RS05810 (LXH20_05810) spx 1134259..1134654 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  LXH20_RS05815 (LXH20_05815) - 1134711..1135367 (-) 657 WP_014417421.1 TerC family protein -
  LXH20_RS05820 (LXH20_05820) mecA 1135643..1136299 (+) 657 WP_038461347.1 adaptor protein MecA Regulator
  LXH20_RS05825 (LXH20_05825) - 1136450..1137610 (+) 1161 WP_022553555.1 competence protein CoiA family protein -
  LXH20_RS05830 (LXH20_05830) pepF 1137838..1139667 (+) 1830 WP_096145021.1 oligoendopeptidase F Regulator
  LXH20_RS05835 (LXH20_05835) - 1139705..1139872 (-) 168 WP_003155026.1 hypothetical protein -
  LXH20_RS05840 (LXH20_05840) spxH 1140159..1141061 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25978.78 Da        Isoelectric Point: 4.1179

>NTDB_id=640884 LXH20_RS05820 WP_038461347.1 1135643..1136299(+) (mecA) [Bacillus velezensis strain BR-01]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=640884 LXH20_RS05820 WP_038461347.1 1135643..1136299(+) (mecA) [Bacillus velezensis strain BR-01]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGAAGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.908

100

0.899