Detailed information    

insolico Bioinformatically predicted

Overview

Name   sinI   Type   Regulator
Locus tag   LXE94_RS12395 Genome accession   NZ_CP090125
Coordinates   2329537..2329710 (+) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis strain Bs96     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context

Location: 2324537..2334710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXE94_RS12380 (LXE94_12355) gcvT 2325337..2326425 (-) 1089 WP_017696204.1 glycine cleavage system aminomethyltransferase GcvT -
  LXE94_RS12385 (LXE94_12360) hepAA 2326866..2328539 (+) 1674 WP_017696203.1 DEAD/DEAH box helicase -
  LXE94_RS12390 (LXE94_12365) yqhG 2328560..2329354 (+) 795 WP_017696202.1 YqhG family protein -
  LXE94_RS12395 (LXE94_12370) sinI 2329537..2329710 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  LXE94_RS12400 (LXE94_12375) sinR 2329744..2330079 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  LXE94_RS12405 (LXE94_12380) tasA 2330172..2330957 (-) 786 WP_017696201.1 biofilm matrix protein TasA -
  LXE94_RS12410 (LXE94_12385) sipW 2331022..2331594 (-) 573 WP_072557060.1 signal peptidase I SipW -
  LXE94_RS12415 (LXE94_12390) tapA 2331578..2332333 (-) 756 WP_017696199.1 amyloid fiber anchoring/assembly protein TapA -
  LXE94_RS12420 (LXE94_12395) yqzG 2332604..2332930 (+) 327 WP_026113671.1 YqzG/YhdC family protein -
  LXE94_RS12425 (LXE94_12400) - 2333047..2334294 (+) 1248 WP_031600262.1 IS256-like element ISBsu2 family transposase -
  LXE94_RS12430 (LXE94_12405) spoIITA 2334350..2334529 (-) 180 WP_014480252.1 YqzE family protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=640698 LXE94_RS12395 WP_003230187.1 2329537..2329710(+) (sinI) [Bacillus subtilis strain Bs96]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=640698 LXE94_RS12395 WP_003230187.1 2329537..2329710(+) (sinI) [Bacillus subtilis strain Bs96]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains

Predicted by InterproScan.

Anti-repressor SinI (SinI)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1