Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LXE94_RS07725 Genome accession   NZ_CP090125
Coordinates   1471537..1472001 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain Bs96     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1466537..1477001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXE94_RS07705 (LXE94_07685) kinA 1467007..1468824 (+) 1818 WP_257986593.1 sporulation histidine kinase KinA -
  LXE94_RS07710 (LXE94_07690) dapX 1468834..1470015 (-) 1182 WP_014476653.1 aminotransferase A -
  LXE94_RS07715 (LXE94_07695) - 1470217..1470378 (-) 162 WP_003245246.1 hypothetical protein -
  LXE94_RS07720 (LXE94_07700) cheV 1470582..1471493 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  LXE94_RS07725 (LXE94_07705) kre 1471537..1472001 (-) 465 WP_003232406.1 YkyB family protein Regulator
  LXE94_RS07730 (LXE94_07710) ykuC 1472127..1473419 (-) 1293 WP_257986594.1 MFS transporter -
  LXE94_RS07735 (LXE94_07715) ltdD 1473495..1473989 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  LXE94_RS07740 (LXE94_07720) ppeE 1474046..1474906 (-) 861 WP_257986595.1 metallophosphoesterase -
  LXE94_RS07745 (LXE94_07725) fadH 1475049..1475813 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=640687 LXE94_RS07725 WP_003232406.1 1471537..1472001(-) (kre) [Bacillus subtilis strain Bs96]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=640687 LXE94_RS07725 WP_003232406.1 1471537..1472001(-) (kre) [Bacillus subtilis strain Bs96]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTTGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1