Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LXE94_RS06325 Genome accession   NZ_CP090125
Coordinates   1219899..1220555 (+) Length   218 a.a.
NCBI ID   WP_003232942.1    Uniprot ID   A0AAQ3ENL6
Organism   Bacillus subtilis strain Bs96     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1214899..1225555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXE94_RS06295 (LXE94_06285) oppF 1215363..1216280 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  LXE94_RS06300 (LXE94_06290) yjbB 1216387..1217604 (+) 1218 WP_257986689.1 MFS transporter -
  LXE94_RS06305 (LXE94_06295) yjbC 1217769..1218347 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  LXE94_RS06310 (LXE94_06300) spx 1218528..1218923 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  LXE94_RS06315 (LXE94_06305) yjbE 1218966..1219622 (-) 657 WP_128441514.1 TerC family protein -
  LXE94_RS06320 (LXE94_06310) - 1219792..1219932 (+) 141 WP_119122854.1 hypothetical protein -
  LXE94_RS06325 (LXE94_06315) mecA 1219899..1220555 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  LXE94_RS06330 (LXE94_06320) - 1220550..1220672 (-) 123 WP_003232940.1 hypothetical protein -
  LXE94_RS06335 (LXE94_06325) coiA 1220716..1221867 (+) 1152 WP_257986543.1 competence protein CoiA Machinery gene
  LXE94_RS06340 (LXE94_06330) pepF 1222097..1223926 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  LXE94_RS06345 (LXE94_06335) - 1223964..1224131 (-) 168 WP_003244944.1 hypothetical protein -
  LXE94_RS06350 (LXE94_06340) spxH 1224445..1225344 (-) 900 WP_041340381.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25762.62 Da        Isoelectric Point: 4.0841

>NTDB_id=640682 LXE94_RS06325 WP_003232942.1 1219899..1220555(+) (mecA) [Bacillus subtilis strain Bs96]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=640682 LXE94_RS06325 WP_003232942.1 1219899..1220555(+) (mecA) [Bacillus subtilis strain Bs96]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991