Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LXE94_RS04660 Genome accession   NZ_CP090125
Coordinates   912660..913454 (+) Length   264 a.a.
NCBI ID   WP_041332784.1    Uniprot ID   -
Organism   Bacillus subtilis strain Bs96     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 907660..918454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXE94_RS04630 (LXE94_04620) sxzA 908500..909531 (+) 1032 WP_017696454.1 iron chelate uptake ABC transporter family permease subunit -
  LXE94_RS04635 (LXE94_04625) yfhB 909646..910526 (+) 881 Protein_862 PhzF family phenazine biosynthesis isomerase -
  LXE94_RS04640 (LXE94_04630) yfhC 910614..911198 (+) 585 WP_003243940.1 nitroreductase -
  LXE94_RS04645 (LXE94_04635) yfhD 911237..911428 (-) 192 WP_003233561.1 YfhD family protein -
  LXE94_RS04650 (LXE94_04640) yfhE 911495..911605 (-) 111 WP_003223230.1 YfhE family protein -
  LXE94_RS04655 (LXE94_04645) yfhF 911660..912571 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  LXE94_RS04660 (LXE94_04650) recX 912660..913454 (+) 795 WP_041332784.1 recombination regulator RecX Regulator
  LXE94_RS04665 (LXE94_04655) yfhH 913456..913770 (+) 315 WP_003244592.1 YfhH family protein -
  LXE94_RS04670 (LXE94_04660) yfhI 913913..915106 (+) 1194 WP_185184614.1 MFS transporter -
  LXE94_RS04675 (LXE94_04665) sspK 915138..915290 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  LXE94_RS04680 (LXE94_04670) yfhJ 915415..915684 (+) 270 WP_003243789.1 YfhJ family protein -
  LXE94_RS04685 (LXE94_04675) - 915795..916937 (+) 1143 Protein_872 IS3 family transposase -
  LXE94_RS04690 (LXE94_04680) yfhK 917111..917629 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  LXE94_RS04695 (LXE94_04685) spdL 917714..918046 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.24 Da        Isoelectric Point: 6.6686

>NTDB_id=640671 LXE94_RS04660 WP_041332784.1 912660..913454(+) (recX) [Bacillus subtilis strain Bs96]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELRQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=640671 LXE94_RS04660 WP_041332784.1 912660..913454(+) (recX) [Bacillus subtilis strain Bs96]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAGACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992