Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LW858_RS18410 Genome accession   NZ_CP090081
Coordinates   3624369..3624827 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain CPT56D-587-MTF     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3619369..3629827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LW858_RS18400 (LW858_18400) - 3620434..3622543 (-) 2110 Protein_3648 polyphosphate kinase -
  LW858_RS18405 (LW858_18405) - 3622653..3624227 (-) 1575 WP_002198132.1 Ppx/GppA family phosphatase -
  LW858_RS18410 (LW858_18410) kre 3624369..3624827 (+) 459 WP_000804864.1 YkyB family protein Regulator
  LW858_RS18415 (LW858_18415) - 3624859..3625521 (-) 663 WP_000922498.1 YkyA family protein -
  LW858_RS18420 (LW858_18420) - 3626136..3626789 (-) 654 WP_000680820.1 diguanylate cyclase -
  LW858_RS18425 (LW858_18425) - 3626952..3627185 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  LW858_RS18430 (LW858_18430) - 3627217..3627723 (-) 507 WP_079004393.1 hypothetical protein -
  LW858_RS18435 (LW858_18435) - 3628135..3629676 (+) 1542 WP_000449910.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=640606 LW858_RS18410 WP_000804864.1 3624369..3624827(+) (kre) [Bacillus cereus strain CPT56D-587-MTF]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=640606 LW858_RS18410 WP_000804864.1 3624369..3624827(+) (kre) [Bacillus cereus strain CPT56D-587-MTF]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493