Detailed information NTG0640363

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PALA20_RS07590
• Genome accession: NZ_CP107064
• Coordinates: 1580638..1581663 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PALA20
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1575638..1586663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PALA20_RS07565 (PALA20_01502)	aroE	1575840..1576664 (-)	825	WP_003097314.1	shikimate dehydrogenase	-
PALA20_RS07570 (PALA20_01503)	hemF	1576722..1577639 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PALA20_RS07575 (PALA20_01504)	-	1577830..1578807 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
PALA20_RS07580 (PALA20_01505)	-	1578817..1579374 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PALA20_RS07585 (PALA20_01506)	dprA	1579415..1580503 (-)	1089	WP_014602326.1	DNA-processing protein DprA	Machinery gene
PALA20_RS07590 (PALA20_01507)	tsaP	1580638..1581663 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PALA20_RS07595 (PALA20_01508)	def	1581802..1582308 (+)	507	WP_003097293.1	peptide deformylase	-
PALA20_RS07600 (PALA20_01509)	fmt	1582363..1583307 (+)	945	WP_023098410.1	methionyl-tRNA formyltransferase	-
PALA20_RS07605 (PALA20_01510)	rsmB	1583304..1584608 (+)	1305	WP_014603454.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PALA20_RS07610 (PALA20_01511)	trkA	1584635..1586008 (+)	1374	WP_003097289.1	Trk system potassium transporter TrkA	-
PALA20_RS07615 (PALA20_01512)	-	1586157..1586474 (+)	318	WP_003097288.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=640363 PALA20_RS07590 WP_003097294.1 1580638..1581663(-) (tsaP) [Pseudomonas aeruginosa strain PALA20]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=640363 PALA20_RS07590 WP_003097294.1 1580638..1581663(-) (tsaP) [Pseudomonas aeruginosa strain PALA20]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393