Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ODQ18_RS17925 | Genome accession | NZ_CP107039 |
| Coordinates | 3453655..3454788 (+) | Length | 377 a.a. |
| NCBI ID | WP_003227715.1 | Uniprot ID | P70962 |
| Organism | Bacillus subtilis strain 11060 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3448655..3459788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ODQ18_RS17895 (ODQ18_17895) | ywmC | 3449464..3450147 (+) | 684 | WP_003227700.1 | vWA domain-containing protein | - |
| ODQ18_RS17900 (ODQ18_17900) | - | 3450278..3450418 (+) | 141 | WP_003227702.1 | hypothetical protein | - |
| ODQ18_RS17905 (ODQ18_17905) | ywmD | 3450471..3451145 (+) | 675 | WP_003243553.1 | vWA domain-containing protein | - |
| ODQ18_RS17910 (ODQ18_17910) | - | 3451240..3451401 (+) | 162 | WP_003227706.1 | hypothetical protein | - |
| ODQ18_RS17915 (ODQ18_17915) | fdhD | 3451634..3452422 (+) | 789 | WP_003227709.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| ODQ18_RS17920 (ODQ18_17920) | moaA | 3452438..3453463 (+) | 1026 | WP_043940213.1 | GTP 3',8-cyclase MoaA | - |
| ODQ18_RS17925 (ODQ18_17925) | rapC | 3453655..3454788 (+) | 1134 | WP_003227715.1 | response regulator aspartate phosphatase RapB | Regulator |
| ODQ18_RS17930 (ODQ18_17930) | - | 3454943..3455422 (+) | 480 | WP_003244390.1 | hypothetical protein | - |
| ODQ18_RS17935 (ODQ18_17935) | csbD | 3455495..3455683 (+) | 189 | WP_015251021.1 | stress response protein CsbD | - |
| ODQ18_RS17940 (ODQ18_17940) | - | 3455904..3456167 (+) | 264 | WP_231573524.1 | ABC transporter | - |
| ODQ18_RS17945 (ODQ18_17945) | - | 3456371..3456529 (+) | 159 | WP_120363539.1 | hypothetical protein | - |
| ODQ18_RS17950 (ODQ18_17950) | ureA | 3456724..3457041 (+) | 318 | WP_003227724.1 | urease subunit gamma | - |
| ODQ18_RS17955 (ODQ18_17955) | ureB | 3457038..3457412 (+) | 375 | WP_041850426.1 | urease subunit beta | - |
| ODQ18_RS17960 (ODQ18_17960) | ureC | 3457409..3459118 (+) | 1710 | WP_015714862.1 | urease subunit alpha | - |
| ODQ18_RS17965 (ODQ18_17965) | ywnA | 3459253..3459654 (+) | 402 | WP_003227734.1 | Rrf2 family transcriptional regulator | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 45037.17 Da Isoelectric Point: 4.8005
>NTDB_id=640325 ODQ18_RS17925 WP_003227715.1 3453655..3454788(+) (rapC) [Bacillus subtilis strain 11060]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
Nucleotide
Download Length: 1134 bp
>NTDB_id=640325 ODQ18_RS17925 WP_003227715.1 3453655..3454788(+) (rapC) [Bacillus subtilis strain 11060]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
42.632 |
100 |
0.43 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.667 |
99.469 |
0.424 |