Detailed information NTG0640246

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ODQ18_RS07140
• Genome accession: NZ_CP107039
• Coordinates: 1380218..1381207 (-)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain 11060
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1375218..1386207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ODQ18_RS07100 (ODQ18_07100)	trmD	1375445..1376176 (-)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ODQ18_RS07105 (ODQ18_07105)	rimM	1376173..1376697 (-)	525	WP_041850834.1	ribosome maturation factor RimM	-
ODQ18_RS07110 (ODQ18_07110)	ylqD	1376702..1377088 (-)	387	WP_014476793.1	YlqD family protein	-
ODQ18_RS07115 (ODQ18_07115)	khpA	1377210..1377455 (-)	246	WP_041850835.1	KH domain-containing protein	-
ODQ18_RS07120 (ODQ18_07120)	rpsP	1377455..1377727 (-)	273	WP_003220815.1	30S ribosomal protein S16	-
ODQ18_RS07125 (ODQ18_07125)	ffh	1377833..1379173 (-)	1341	WP_014113771.1	signal recognition particle protein	-
ODQ18_RS07130 (ODQ18_07130)	srpM	1379187..1379519 (-)	333	WP_003238590.1	putative DNA-binding protein	-
ODQ18_RS07135 (ODQ18_07135)	sivC	1379696..1380181 (+)	486	WP_003245834.1	Ig-like domain-containing protein	-
ODQ18_RS07140 (ODQ18_07140)	pilA	1380218..1381207 (-)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
ODQ18_RS07145 (ODQ18_07145)	smc	1381227..1384787 (-)	3561	WP_128472225.1	chromosome segregation protein SMC	-
ODQ18_RS07150 (ODQ18_07150)	rncS	1384888..1385637 (-)	750	WP_003232030.1	ribonuclease III	-
ODQ18_RS07155 (ODQ18_07155)	acpP	1385777..1386010 (-)	234	WP_003154310.1	acyl carrier protein	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=640246 ODQ18_RS07140 WP_003232026.1 1380218..1381207(-) (pilA) [Bacillus subtilis strain 11060]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=640246 ODQ18_RS07140 WP_003232026.1 1380218..1381207(-) (pilA) [Bacillus subtilis strain 11060]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAACTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCCCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401