Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FH104_RS06085 Genome accession   NZ_CP090014
Coordinates   1216604..1217269 (+) Length   221 a.a.
NCBI ID   WP_002454771.1    Uniprot ID   -
Organism   Staphylococcus hominis strain acrlk     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1211604..1222269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FH104_RS06060 (FH104_06040) - 1211970..1213184 (+) 1215 WP_054105923.1 O-antigen ligase family protein -
  FH104_RS06065 (FH104_06045) - 1213171..1214115 (+) 945 WP_054105922.1 LCP family protein -
  FH104_RS06070 (FH104_06050) - 1214223..1215698 (-) 1476 WP_054105921.1 alkaline phosphatase -
  FH104_RS06075 (FH104_06055) - 1216080..1216253 (+) 174 WP_176743953.1 hypothetical protein -
  FH104_RS06080 (FH104_06060) - 1216424..1216591 (+) 168 WP_002488268.1 hypothetical protein -
  FH104_RS06085 (FH104_06065) braR 1216604..1217269 (+) 666 WP_002454771.1 response regulator transcription factor Regulator
  FH104_RS06090 (FH104_06070) braS 1217275..1218171 (+) 897 WP_054105920.1 sensor histidine kinase Regulator
  FH104_RS06095 (FH104_06075) - 1218303..1219052 (+) 750 WP_002488212.1 ABC transporter ATP-binding protein -
  FH104_RS06100 (FH104_06080) - 1219054..1221009 (+) 1956 WP_054105919.1 FtsX-like permease family protein -
  FH104_RS06105 (FH104_06085) - 1221102..1221866 (+) 765 WP_054105918.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25456.21 Da        Isoelectric Point: 4.5773

>NTDB_id=640210 FH104_RS06085 WP_002454771.1 1216604..1217269(+) (braR) [Staphylococcus hominis strain acrlk]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=640210 FH104_RS06085 WP_002454771.1 1216604..1217269(+) (braR) [Staphylococcus hominis strain acrlk]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGATAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGATAATATGGATCAAATTATGGCAATTCAAATGGGTGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTTCGTAGAACATATGATTTAACGGTTTCAAATAATGAGATGACTGTTAAAGGGTGTA
AGCTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGAAAATATGTCAATCGTACAGCAATTATTGAAAAATGTTGGGAATCGGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGCCTACGTAAAAAACTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

100

0.774