Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   FH100_RS08520 Genome accession   NZ_CP090011
Coordinates   1709348..1710382 (+) Length   344 a.a.
NCBI ID   WP_002450020.1    Uniprot ID   -
Organism   Staphylococcus hominis strain acrlg     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1704348..1715382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FH100_RS08495 (FH100_08475) - 1705041..1706030 (-) 990 WP_002488087.1 FUSC family protein -
  FH100_RS08500 (FH100_08480) map 1706204..1706956 (+) 753 WP_002455125.1 type I methionyl aminopeptidase -
  FH100_RS08505 (FH100_08485) - 1707005..1708015 (-) 1011 WP_002488088.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  FH100_RS08510 (FH100_08490) - 1708243..1708629 (+) 387 WP_002450072.1 hypothetical protein -
  FH100_RS08515 (FH100_08495) liaF 1708650..1709351 (+) 702 WP_002450089.1 cell wall-active antibiotics response protein LiaF -
  FH100_RS08520 (FH100_08500) vraS 1709348..1710382 (+) 1035 WP_002450020.1 sensor histidine kinase Regulator
  FH100_RS08525 (FH100_08505) vraR 1710384..1711013 (+) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  FH100_RS08530 (FH100_08510) - 1711093..1712301 (-) 1209 WP_002488060.1 YihY/virulence factor BrkB family protein -
  FH100_RS08535 (FH100_08515) - 1712393..1712674 (-) 282 WP_002488074.1 hypothetical protein -
  FH100_RS08540 (FH100_08520) - 1712680..1713144 (-) 465 WP_002488081.1 low molecular weight protein-tyrosine-phosphatase -
  FH100_RS08545 (FH100_08525) - 1713286..1713492 (+) 207 WP_002488079.1 DUF1128 domain-containing protein -
  FH100_RS08550 (FH100_08530) - 1713504..1714751 (+) 1248 WP_002488059.1 aminopeptidase -
  FH100_RS08555 (FH100_08535) - 1714784..1715317 (+) 534 WP_002488082.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39657.23 Da        Isoelectric Point: 6.3137

>NTDB_id=640182 FH100_RS08520 WP_002450020.1 1709348..1710382(+) (vraS) [Staphylococcus hominis strain acrlg]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQRLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=640182 FH100_RS08520 WP_002450020.1 1709348..1710382(+) (vraS) [Staphylococcus hominis strain acrlg]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTATATAGCATGCTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACATGCCATTGAAGGTGAAACGGTAGGGATTAATGATAAAAACATAGAACTATATAATGAGACAATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGAGATTAAGAATTAAAACTCAAAATTTAACAAATGAAAACTATA
ATATGAATGACATTAAAGTTAAAAAAATCATAGAAGATGAGCGTCAGCGTTTAGCAAGGGAACTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGCTATCAGCGATAAAAGAAACAGAACTAGCACCACCTCTTAATCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTATTACTACATTTGCGACCTTTAGGACTCAAAG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTGATTTATGATATA
CAAGATTTTAAAGTTCCAAAAGGAATTGAAGATCATCTATTTCGAATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTAATGGAACTAAAGTGACAGTAGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAGGATAATGGTAAAG
GTTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTTTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

89.826

100

0.898