Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   LV497_RS03190 Genome accession   NZ_CP090007
Coordinates   775733..776809 (-) Length   358 a.a.
NCBI ID   WP_245085265.1    Uniprot ID   -
Organism   Streptococcus salivarius strain SALI-10     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 770733..781809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS03165 (LV497_03165) - 771478..771798 (+) 321 WP_038676678.1 hypothetical protein -
  LV497_RS03170 (LV497_03170) - 771844..773910 (-) 2067 WP_181670670.1 sodium:proton antiporter -
  LV497_RS03175 (LV497_03175) - 773919..774161 (-) 243 WP_245085259.1 hypothetical protein -
  LV497_RS03180 (LV497_03180) - 774158..774706 (-) 549 WP_245085262.1 class I SAM-dependent methyltransferase -
  LV497_RS03185 (LV497_03185) - 774703..775647 (-) 945 WP_022495907.1 TIGR01212 family radical SAM protein -
  LV497_RS03190 (LV497_03190) sepM 775733..776809 (-) 1077 WP_245085265.1 SepM family pheromone-processing serine protease Regulator
  LV497_RS03195 (LV497_03195) coaD 776787..777284 (-) 498 WP_245085268.1 pantetheine-phosphate adenylyltransferase -
  LV497_RS03200 (LV497_03200) rsmD 777317..777865 (-) 549 WP_231910681.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  LV497_RS03205 (LV497_03205) trxB 778006..778926 (-) 921 WP_002884706.1 thioredoxin-disulfide reductase -
  LV497_RS03210 (LV497_03210) - 778992..779216 (-) 225 WP_022495904.1 DUF4059 family protein -
  LV497_RS03215 (LV497_03215) - 779429..780172 (-) 744 WP_022495903.1 amino acid ABC transporter ATP-binding protein -
  LV497_RS03220 (LV497_03220) - 780172..780918 (-) 747 WP_118189357.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38987.68 Da        Isoelectric Point: 9.3844

>NTDB_id=640108 LV497_RS03190 WP_245085265.1 775733..776809(-) (sepM) [Streptococcus salivarius strain SALI-10]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNNFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=640108 LV497_RS03190 WP_245085265.1 775733..776809(-) (sepM) [Streptococcus salivarius strain SALI-10]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTATTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGCTTAATAATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCCG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGCTTCAAGGGTGTCCTTAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACTTTTGATAACTCTGCTGATTTGATAAAATACGTTCAAGGTCTTAA
GCTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCTACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACTGAGGTCAAGAGTCCTGAGAATGTGAAGTTTAAACTTGAT
GGTGTTGGCGGACCAAGTGCGGGTCTTATGTTTACCCTAGCTATTTACGATCAGGTATCTGGTCAAGATCTTAAGGCTGG
CCGTAAGATAGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTCGTGCCAAATAATCCAGTAACCAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

95.251

0.623