Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   P795_RS02315 Genome accession   NC_023028
Coordinates   479180..480064 (+) Length   294 a.a.
NCBI ID   WP_043960327.1    Uniprot ID   -
Organism   Acinetobacter baumannii ZW85-1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 474180..485064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P795_RS02290 (P795_2245) - 474579..475826 (-) 1248 WP_000893466.1 YihY family inner membrane protein -
  P795_RS02295 (P795_2250) wrbA 476114..476707 (+) 594 WP_001183355.1 NAD(P)H:quinone oxidoreductase -
  P795_RS02300 (P795_2255) - 476759..477334 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  P795_RS02305 (P795_2260) - 477407..478120 (-) 714 WP_000201544.1 DUF3108 domain-containing protein -
  P795_RS02310 (P795_2265) - 478278..478949 (-) 672 WP_001193960.1 hypothetical protein -
  P795_RS02315 (P795_2270) tonB2 479180..480064 (+) 885 WP_043960327.1 energy transducer TonB Machinery gene
  P795_RS02320 (P795_2275) ybeY 480154..480630 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  P795_RS02325 (P795_2280) - 480640..481728 (-) 1089 WP_000122983.1 PhoH family protein -
  P795_RS02330 (P795_2285) miaB 481766..483217 (-) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33729.63 Da        Isoelectric Point: 9.0935

>NTDB_id=63962 P795_RS02315 WP_043960327.1 479180..480064(+) (tonB2) [Acinetobacter baumannii ZW85-1]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFMLLIHFAMPTPSEQSTKEIAISIRPNEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKMQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=63962 P795_RS02315 WP_043960327.1 479180..480064(+) (tonB2) [Acinetobacter baumannii ZW85-1]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTATGTTGCTCATCCATTTTGCGATGCCTACGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTAATGAAGATGTGATCAAACATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAATGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

98.639

100

0.986

Multiple sequence alignment