Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LVB87_RS01185 Genome accession   NZ_CP089925
Coordinates   246499..246897 (-) Length   132 a.a.
NCBI ID   WP_232900404.1    Uniprot ID   -
Organism   Lysobacter sp. KIS68-7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 241499..251897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVB87_RS01170 (LVB87_01170) - 243513..245519 (-) 2007 WP_232899099.1 methyl-accepting chemotaxis protein -
  LVB87_RS01175 (LVB87_01175) - 245549..246100 (-) 552 WP_232899101.1 chemotaxis protein CheW -
  LVB87_RS01180 (LVB87_01180) - 246113..246478 (-) 366 WP_156643282.1 response regulator -
  LVB87_RS01185 (LVB87_01185) pilG 246499..246897 (-) 399 WP_232900404.1 twitching motility response regulator PilG Regulator
  LVB87_RS01190 (LVB87_01190) gshB 247098..248057 (+) 960 WP_232899102.1 glutathione synthase -
  LVB87_RS01195 (LVB87_01195) - 248075..248956 (+) 882 WP_232899104.1 energy transducer TonB -
  LVB87_RS01200 (LVB87_01200) tsaB 249167..249865 (-) 699 WP_232899105.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  LVB87_RS01205 (LVB87_01205) - 249862..250260 (-) 399 WP_232899106.1 VOC family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14585.86 Da        Isoelectric Point: 6.9845

>NTDB_id=639124 LVB87_RS01185 WP_232900404.1 246499..246897(-) (pilG) [Lysobacter sp. KIS68-7]
MQEEGATASLGGLRVMVIDDSKTIRRTAETLLKREGAEVVTATDGFEALAKIADNQPQIIFVDIMMPRLDGYQTCALIKN
NALFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=639124 LVB87_RS01185 WP_232900404.1 246499..246897(-) (pilG) [Lysobacter sp. KIS68-7]
ATGCAGGAAGAGGGCGCGACCGCCAGCCTCGGTGGCCTGAGGGTGATGGTCATCGACGACTCGAAGACGATCCGGCGCAC
CGCCGAGACCTTGCTCAAGCGCGAGGGCGCGGAGGTCGTGACCGCGACCGACGGCTTCGAGGCGCTCGCGAAGATCGCCG
ACAACCAGCCGCAGATCATTTTCGTCGACATCATGATGCCGAGGCTCGACGGATATCAGACCTGCGCGCTGATCAAGAAC
AATGCGCTGTTCAAATCCACGCCCGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGGGGCCGCATCGT
CGGCTCCGAGCAATACCTGACAAAACCATTCACACGCGAAGAACTGCTCGACGCGATCCGCAAGCACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.581

93.939

0.682