Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LVB77_RS05920 Genome accession   NZ_CP089924
Coordinates   1376742..1377140 (+) Length   132 a.a.
NCBI ID   WP_055900524.1    Uniprot ID   -
Organism   Lysobacter sp. 5GHs7-4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1371742..1382140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVB77_RS05895 (LVB77_05895) - 1372607..1373035 (+) 429 WP_232909263.1 VOC family protein -
  LVB77_RS05900 (LVB77_05900) tsaB 1373086..1373832 (+) 747 WP_232909264.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  LVB77_RS05905 (LVB77_05905) lepB 1373927..1374544 (+) 618 WP_232909265.1 signal peptidase I -
  LVB77_RS05910 (LVB77_05910) - 1374571..1375386 (-) 816 WP_232910178.1 energy transducer TonB -
  LVB77_RS05915 (LVB77_05915) gshB 1375449..1376402 (-) 954 WP_232909266.1 glutathione synthase -
  LVB77_RS05920 (LVB77_05920) pilG 1376742..1377140 (+) 399 WP_055900524.1 twitching motility response regulator PilG Regulator
  LVB77_RS05925 (LVB77_05925) - 1377161..1377526 (+) 366 WP_232909267.1 response regulator -
  LVB77_RS05930 (LVB77_05930) - 1377545..1378096 (+) 552 WP_232909268.1 chemotaxis protein CheW -
  LVB77_RS05935 (LVB77_05935) - 1378206..1380230 (+) 2025 WP_232909269.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14820.18 Da        Isoelectric Point: 7.2450

>NTDB_id=639104 LVB77_RS05920 WP_055900524.1 1376742..1377140(+) (pilG) [Lysobacter sp. 5GHs7-4]
MLDEARNGSLDGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQHPQIIFVDIMMPRLDGYQTCALIKN
NQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=639104 LVB77_RS05920 WP_055900524.1 1376742..1377140(+) (pilG) [Lysobacter sp. 5GHs7-4]
ATGCTCGATGAGGCTCGTAACGGCAGCCTCGACGGTTTGAAGGTCATGGTGATCGATGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAACGCGAAGGTTGTGAGGTGGTCACGGCCACGGACGGATTCGAAGCACTGGCGAAGATCGCCG
ACCAGCATCCACAAATCATCTTCGTGGATATCATGATGCCGCGATTGGACGGCTATCAAACCTGCGCGCTGATCAAGAAC
AACCAGTTGTTCAAGAGCACGCCGGTGATCATGCTGTCCTCGAAGGACGGTCTGTTCGACAAGGCGAGGGGTCGTATCGT
CGGGTCGGAGCAGTACCTCACCAAACCGTTTACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.939

0.705