Detailed information NTG0638809

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OEG89_RS16380
• Genome accession: NZ_CP106929
• Coordinates: 3270832..3271857 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MFDS1001074
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3265832..3276857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OEG89_RS16350 (OEG89_16350)	zapB	3265916..3266161 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
OEG89_RS16355 (OEG89_16355)	rraA	3266246..3266731 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OEG89_RS16360 (OEG89_16360)	menA	3266824..3267750 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OEG89_RS16365 (OEG89_16365)	hslU	3267817..3269148 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
OEG89_RS16370 (OEG89_16370)	hslV	3269158..3269688 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OEG89_RS16375 (OEG89_16375)	ftsN	3269781..3270740 (-)	960	WP_000068828.1	cell division protein FtsN	-
OEG89_RS16380 (OEG89_16380)	cytR	3270832..3271857 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
OEG89_RS16385 (OEG89_16385)	priA	3272013..3274211 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
OEG89_RS16390 (OEG89_16390)	rpmE	3274414..3274626 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
OEG89_RS16395 (OEG89_16395)	yiiX	3274687..3275295 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
OEG89_RS16400 (OEG89_16400)	metJ	3275479..3275796 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=638809 OEG89_RS16380 WP_000644904.1 3270832..3271857(-) (cytR) [Escherichia coli strain MFDS1001074]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=638809 OEG89_RS16380 WP_000644904.1 3270832..3271857(-) (cytR) [Escherichia coli strain MFDS1001074]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628