Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KUH140013_RS09060 Genome accession   NZ_AP020324
Coordinates   1737111..1737956 (-) Length   281 a.a.
NCBI ID   WP_025175307.1    Uniprot ID   -
Organism   Staphylococcus aureus strain KUN1163     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1732111..1742956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KUH140013_RS09025 (KUN1163_1679) rpsR 1733099..1733341 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  KUH140013_RS09030 (KUN1163_1680) ssbA 1733393..1733896 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  KUH140013_RS09035 (KUN1163_1681) rpsF 1733917..1734213 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  KUH140013_RS09040 (KUN1163_1682) - 1734457..1734648 (+) 192 WP_001052484.1 hypothetical protein -
  KUH140013_RS09045 (KUN1163_1683) ychF 1734734..1735831 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  KUH140013_RS09050 (KUN1163_1684) - 1735843..1736046 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  KUH140013_RS09055 (KUN1163_1685) - 1736076..1736957 (-) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  KUH140013_RS09060 (KUN1163_1686) spo0J 1737111..1737956 (-) 846 WP_025175307.1 ParB/RepB/Spo0J family partition protein Regulator
  KUH140013_RS09065 (KUN1163_1687) - 1738618..1739721 (+) 1104 WP_000655692.1 PLP-dependent transferase -
  KUH140013_RS09070 (KUN1163_1688) metC 1739718..1740878 (+) 1161 WP_000175854.1 cystathionine beta-lyase MetC -
  KUH140013_RS09075 (KUN1163_1689) - 1740847..1742688 (+) 1842 WP_000077317.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32840.89 Da        Isoelectric Point: 10.1257

>NTDB_id=63869 KUH140013_RS09060 WP_025175307.1 1737111..1737956(-) (spo0J) [Staphylococcus aureus strain KUN1163]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSKTDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQDDFVRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=63869 KUH140013_RS09060 WP_025175307.1 1737111..1737956(-) (spo0J) [Staphylococcus aureus strain KUN1163]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGAAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGATGA
CTTTGTGAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384

Multiple sequence alignment