Detailed information NTG0063857

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: KUH140013_RS06915
• Genome accession: NZ_AP020324
• Coordinates: 1323727..1324809 (-)
• Length: 360 a.a.
• NCBI ID: WP_001557172.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KUN1163
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1318727..1329809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KUH140013_RS06895	-	1319336..1319440 (-)	105	WP_001790092.1	hypothetical protein	-
KUH140013_RS06900 (KUN1163_1292)	secA	1319482..1322013 (-)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
KUH140013_RS06905 (KUN1163_1293)	hpf	1322427..1322999 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
KUH140013_RS06910 (KUN1163_1294)	-	1323060..1323734 (-)	675	WP_001057965.1	ComF family protein	-
KUH140013_RS06915 (KUN1163_1295)	comFA	1323727..1324809 (-)	1083	WP_001557172.1	DEAD/DEAH box helicase	Machinery gene
KUH140013_RS06920 (KUN1163_1296)	fakB1	1325173..1326039 (-)	867	WP_000686347.1	fatty acid kinase binding subunit FakB1	-
KUH140013_RS06925 (KUN1163_1297)	-	1326183..1326824 (+)	642	WP_000192949.1	YigZ family protein	-
KUH140013_RS06930 (KUN1163_1298)	-	1326989..1328044 (-)	1056	WP_000258150.1	glycosyltransferase family 4 protein	-
KUH140013_RS06935 (KUN1163_1299)	gdpS	1328362..1329432 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42017.47 Da
• Isoelectric Point: 9.6864

>NTDB_id=63857 KUH140013_RS06915 WP_001557172.1 1323727..1324809(-) (comFA) [Staphylococcus aureus strain KUN1163]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=63857 KUH140013_RS06915 WP_001557172.1 1323727..1324809(-) (comFA) [Staphylococcus aureus strain KUN1163]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCGCGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTACATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTGCTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367