Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   SLV14_RS16880 Genome accession   NZ_CP106840
Coordinates   3934845..3935969 (+) Length   374 a.a.
NCBI ID   WP_026170238.1    Uniprot ID   A0A640THM3
Organism   Streptomyces sp. Je 1-4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3929845..3940969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SLV14_RS16865 (SLV14_003382) - 3930395..3931258 (+) 864 WP_208681699.1 hypothetical protein -
  SLV14_RS16870 (SLV14_003383) - 3931310..3933058 (-) 1749 WP_263269929.1 sigma-70 family RNA polymerase sigma factor -
  SLV14_RS16875 (SLV14_003384) radA 3933307..3934719 (+) 1413 WP_263269931.1 DNA repair protein RadA Machinery gene
  SLV14_RS16880 (SLV14_003385) disA 3934845..3935969 (+) 1125 WP_026170238.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  SLV14_RS16885 (SLV14_003386) - 3935994..3936497 (-) 504 WP_411577458.1 pyridoxamine 5'-phosphate oxidase family protein -
  SLV14_RS16890 (SLV14_003387) - 3936579..3937904 (-) 1326 WP_263269933.1 globin domain-containing protein -
  SLV14_RS16895 (SLV14_003388) - 3938187..3938888 (+) 702 WP_263269935.1 response regulator transcription factor -
  SLV14_RS16900 (SLV14_003389) - 3938995..3940629 (-) 1635 WP_263273191.1 GAF domain-containing protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40289.13 Da        Isoelectric Point: 4.9306

>NTDB_id=638484 SLV14_RS16880 WP_026170238.1 3934845..3935969(+) (disA) [Streptomyces sp. Je 1-4]
MAANDRASTPGRSGGSSSTESLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQAGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALAELDALSHTELLELPIVARALGYSGAPETLDSAVSPRGFRLLAKVPRLPGT
VIDRLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=638484 SLV14_RS16880 WP_026170238.1 3934845..3935969(+) (disA) [Streptomyces sp. Je 1-4]
GTGGCAGCCAACGACCGGGCATCGACTCCCGGCAGGTCCGGTGGCAGTTCCTCCACCGAGAGCCTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCCGGTACGGCCCTGCGCGACGGACTGGAGCGCATCCTGCGCGGCAACACCGGCGGACTGATCGTGC
TGGGCTTCGACAAGACCGTCGAAACCATGTGCACCGGCGGATTCGTCCTCGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGTGCGCTGGTCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTCCAGCTGGTCCC
GGACGCCTCCATCCCGACGGAGGAGACCGGCACCCGCCACCGCACCGCCCAGCGCGTCTCCATCCAGGCCGGCTTCCCGG
TCGTCTCCGTCAGCCAGTCGATGCGCCTGATCGCCCTCTACGTCGACGGCGAGCGCCGCGTCCTGGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACTTGGTGACGGTCCGCGATGTCACCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAACTCGGCACGGACGGCCGGCTGCTCGCCCTCCAGCTGGAGGAGCTGATCGCC
GGCGTGGAGCCCGAGCGGGAGCTGGTCGTCCGCGACTACGTCCCCGAGCCGACCGCCAAGCGCTCCCGTACGGTCGCCGA
GGCGCTCGCCGAGCTGGACGCCCTCAGCCACACCGAGCTCCTCGAACTCCCCATCGTGGCCCGCGCGCTGGGCTACAGCG
GCGCCCCCGAGACCCTGGACTCCGCGGTCTCGCCGCGCGGCTTCCGCCTGCTGGCGAAGGTCCCCCGGCTGCCCGGCACG
GTCATCGACCGCCTCGTCGACCACTTCGGCGGCCTGCAGAAGCTCCTCGCGGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCGCGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A640THM3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

92.513

0.422